Evidence map›Paper›PMID 31158829›Full record

ArticlePhysics in medicine and biology2019

Conversion of computational human phantoms into DICOM-RT for normal tissue dose assessment in radiotherapy patients.

Keith T Griffin, Matthew M Mille, Christopher Pelletier, Mahesh Gopalakrishnan, Jae Won Jung, Choonik Lee, John Kalapurakal, Anil Pyakuryal, Choonsik Lee

Open access · greenAbstract read
In one paragraph

Article in Physics in medicine and biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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  7. Development and validation of an age-scalable cardiac model with substructures for dosimetry in late-effects studies of childhood cancer survivors.Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Keith T GriffinDivision of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Rockville, MD 20850, United States of America.ORCID 0000-0002-9628-3791
Matthew M MilleDivision of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Rockville, MD 20850, United States of America.
Christopher PelletierDepartment of Physics, East Carolina University, Greenville, NC 27858, United States of America.
Mahesh GopalakrishnanDepartment of Radiation Oncology, Northwestern Memorial Hospital, Chicago, IL 60611, United States of America.
Jae Won JungDepartment of Physics, East Carolina University, Greenville, NC 27858, United States of America.
Choonik LeeDepartment of Radiation Oncology, University of Michigan, Ann Arbor, MI 48109, United States of America.ORCID 0000-0002-5769-5945
John KalapurakalDepartment of Radiation Oncology, Northwestern Memorial Hospital, Chicago, IL 60611, United States of America.
Anil PyakuryalDivision of Science and Mathematics, University of District of Columbia, Washington, DC 20008, United States of America.
Choonsik LeeDivision of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Rockville, MD 20850, United States of America.
National Institutes of Health · USEast Carolina University · USNorthwestern Memorial Hospital · USUniversity of the District of Columbia · US

Funding

Studies of Populations Exposed to Therapeutic Medical Radiation and Other AgentsZIACP010131 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI MORTON, LINDSAY · 2009 to 2025
$81.0M
Retrospective NCI Phantom-Monte Carlo Dosimetry for Late Effects in Wilms TumorR01CA219013 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI KALAPURAKAL, JOHN ANDREW · 2017 to 2021
$2.8M
Intramural NIH HHS Z99 CA999999Intramural NIH HHS ZIA CP010131NCI NIH HHS R01 CA219013
6 · The paper itself

Abstract

Radiotherapy (RT) treatment planning systems (TPS) are designed for the fast calculation of dose to the tumor bed and nearby organs at risk using x-ray computed tomography (CT) images. However, CT images for a patient are typically available for only a small portion of the body, and in some cases, such as for retrospective epidemiological studies, no images may be available at all. When dose to organs that lie out-of-scan must be estimated, a convenient alternative for the unknown patient anatomy is to use a matching whole-body computational phantom as a surrogate. The purpose of the current work is to connect such computational phantoms to commercial RT TPS for retrospective organ dose estimation. A custom software with graphical user interface (GUI), called the DICOM-RT Generator, was developed in MATLAB to convert voxel computational phantoms into the digital imaging and communications in medicine radiotherapy (DICOM-RT) format, compatible with commercial TPS. DICOM CT image sets for the phantoms are created via a density-to-Hounsfield unit (HU) conversion curve. Accompanying structure sets containing the organ contours are automatically generated by tracing binary masks of user-specified organs on each phantom CT slice. The software was tested on a library of body size-dependent phantoms, the International Commission on Radiological Protection reference phantoms, and a canine voxel phantom, taking only a few minutes per conversion. The resulting DICOM-RT files were tested on several commercial TPS. As an example application, a library of converted phantoms was used to estimate organ doses for members of the National Wilms Tumor Study (NWTS) cohort. The converted phantom library, in DICOM format, and a standalone MATLAB-compiled executable of the DICOM-RT Generator are available for others to use for research purposes (http://ncidose.cancer.gov).

Indexed as

Phantoms, ImagingRadiation DosageTomography, X-Ray ComputedAnimalsBody SizeChildDogsHumansMaleOrgans at RiskRadiation ProtectionRadiotherapy, Image-GuidedRadiotherapy Planning, Computer-AssistedSoftware

Identifiers

PMID31158829
PMCPMC6612588
OpenAlexW2948478260

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.