Evidence map›Paper›PMID 31158401›Full record

ArticleThe Journal of allergy and clinical immunology2019

EMSY expression affects multiple components of the skin barrier with relevance to atopic dermatitis.

Martina S Elias, Sheila C Wright, Judit Remenyi, James C Abbott, Susan E Bray, Christian Cole, Sharon Edwards, Marek Gierlinski, Mateusz Glok, John A McGrath and 7 more

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of allergy and clinical immunology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Update on the Pathogenesis and Therapy of Atopic Dermatitis.Clinical reviews in allergy & immunology · 2021
    Review
  11. Article
  12. Recent advances in atopic dermatitis.Current opinion in immunology · 2020
    Review
  13. Review
  14. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Martina S EliasSkin Research Group, Division of Molecular and Clinical Medicine, School of Medicine, University of Dundee, Dundee, United Kingdom. Electronic address: m.elias@dundee.ac.uk.
Sheila C WrightSkin Research Group, Division of Molecular and Clinical Medicine, School of Medicine, University of Dundee, Dundee, United Kingdom.
Judit RemenyiSkin Research Group, Division of Molecular and Clinical Medicine, School of Medicine, University of Dundee, Dundee, United Kingdom.
James C AbbottData Analysis/Bioinformatics Group, School of Life Sciences, University of Dundee, Dundee, United Kingdom.
Susan E BrayNHS Research Scotland Biorepository Tayside, Ninewells Hospital and Medical School, University of Dundee, Dundee, United Kingdom.
Christian ColeData Analysis/Bioinformatics Group, School of Life Sciences, University of Dundee, Dundee, United Kingdom.
Sharon EdwardsDepartment of Pathology, Ninewells Hospital and Medical School, Dundee, United Kingdom.
Marek GierlinskiData Analysis/Bioinformatics Group, School of Life Sciences, University of Dundee, Dundee, United Kingdom.
Mateusz GlokSkin Research Group, Division of Molecular and Clinical Medicine, School of Medicine, University of Dundee, Dundee, United Kingdom.
John A McGrathSt John's Institute of Dermatology, King's College London (Guy's Campus), London, United Kingdom.
William V NicholsonSkin Research Group, Division of Molecular and Clinical Medicine, School of Medicine, University of Dundee, Dundee, United Kingdom.
Lavinia PaternosterMRC Integrative Epidemiology Unit, Population Health Sciences, Bristol Medical School, University of Bristol, Bristol, United Kingdom.
Alan R PrescottDundee Imaging Facility, School of Life Sciences, University of Dundee, Dundee, United Kingdom.
Sara Ten HaveCentre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dundee, United Kingdom.
Phillip D WhitfieldLipidomics Research Facility, Division of Biomedical Sciences, University of the Highlands and Islands, Inverness, United Kingdom.
Angus I LamondCentre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dundee, United Kingdom.
Sara J BrownSkin Research Group, Division of Molecular and Clinical Medicine, School of Medicine, University of Dundee, Dundee, United Kingdom; Department of Dermatology, Ninewells Hospital, Dundee, United Kingdom. Electronic address: s.j.brown@dundee.ac.uk.
University of Dundee · GBKing's College London · GBNinewells Hospital · GBUniversity of Bristol · GBUniversity of the Highlands and Islands · GB

Funding

Medical Research Council MC_UU_00011/1Wellcome TrustWellcome Trust 097945/B/11/ZWellcome Trust 105024/Z/14/ZWellcome Trust 106865/Z/15/ZWellcome Trust 108058/Z/15/Z
6 · The paper itself

Abstract

backgroundAtopic dermatitis (AD) is a common, complex, and highly heritable inflammatory skin disease. Genome-wide association studies offer opportunities to identify molecular targets for drug development. A risk locus on chromosome 11q13.5 lies between 2 candidate genes, EMSY and LRRC32 (leucine-rich repeat-containing 32) but the functional mechanisms affecting risk of AD remain unclear.

objectivesWe sought to apply a combination of genomic and molecular analytic techniques to investigate which genes are responsible for genetic risk at this locus and to define mechanisms contributing to atopic skin disease.

methodsWe used interrogation of available genomic and chromosome conformation data in keratinocytes, small interfering RNA (siRNA)-mediated knockdown in skin organotypic culture and functional assessment of barrier parameters, mass spectrometric global proteomic analysis and quantitative lipid analysis, electron microscopy of organotypic skin, and immunohistochemistry of human skin samples.

resultsGenomic data indicate active promoters in the genome-wide association study locus and upstream of EMSY; EMSY, LRRC32, and intergenic variants all appear to be within a single topologically associating domain. siRNA-knockdown of EMSY in organotypic culture leads to enhanced development of barrier function, reflecting increased expression of structural and functional proteins, including filaggrin and filaggrin-2, as well as long-chain ceramides. Conversely, overexpression of EMSY in keratinocytes leads to a reduction in markers of barrier formation. Skin biopsy samples from patients with AD show greater EMSY staining in the nucleus, which is consistent with an increased functional effect of this transcriptional control protein.

conclusionOur findings demonstrate an important role for EMSY in transcriptional regulation and skin barrier formation, supporting EMSY inhibition as a therapeutic approach.

Indexed as

Chromosomes, Human, Pair 11Dermatitis, AtopicFemaleFilaggrin ProteinsGene Expression RegulationGenome-Wide Association StudyHumansMaleMembrane ProteinsNeoplasm ProteinsNuclear ProteinsRepressor ProteinsSkinTranscription, GeneticEMSY protein, humanFilaggrin ProteinsFLG2 protein, humanFLG protein, humanLRRC32 protein, humanMembrane ProteinsNeoplasm ProteinsNuclear ProteinsRepressor ProteinsAtopic dermatitisatopic eczemaEMSYfilaggringeneticsgenomicslipidomicsorganotypicproteomicssiRNA knockdown

Identifiers

PMID31158401
PMCPMC6683598
OpenAlexW2947130196

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.