Evidence map›Paper›PMID 31156693›Full record

ArticleFrontiers in genetics2019

Genome to Phenome: Improving Animal Health, Production, and Well-Being - A New USDA Blueprint for Animal Genome Research 2018-2027.

Caird Rexroad, Jeffrey Vallet, Lakshmi Kumar Matukumalli, James Reecy, Derek Bickhart, Harvey Blackburn, Mark Boggess, Hans Cheng, Archie Clutter, Noelle Cockett and 13 more

Abstract read
In one paragraph

Article in Frontiers in genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed.

  1. Advances in Molecular Genetics and Breeding of Cattle, Sheep, and Goats.Animals : an open access journal from MDPI · 2026
    Article
  2. Article
  3. Article
  4. Polymorphisms in IRF3 exon 1 influence the immune response to Brucella infection in small ruminants.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Article
  5. RNA variation as the driver of genomic efficiency and phenotypic complexity.International journal of biological sciences · 2026
    Review
  6. Article
  7. Effects of L-Carnitine on the Developmental Competence of Bovine Oocytes.Animals : an open access journal from MDPI · 2025
    Article
  8. Transforming beef quality through healthy breeding: a strategy to reduce carcinogenic compounds and enhance human health: a review.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Review
  9. Article
  10. Bovine Endometrium Drives and Responds to Divergence of In Vitro Produced Conceptus Biochemistry.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  11. Landscape analysis of breeding value patterns in Brazilian Montana.Tropical animal health and production · 2025
    Article
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Review
  19. Application of Genomic Selection in Beef Cattle Disease Prevention.Animals : an open access journal from MDPI · 2025
    Review
  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Caird RexroadOffice of National Programs, Agricultural Research Service, United States Department of Agriculture, Beltsville, MD, United States.
Jeffrey ValletOffice of National Programs, Agricultural Research Service, United States Department of Agriculture, Beltsville, MD, United States.
Lakshmi Kumar MatukumalliNational Institute of Food and Agriculture, United States Department of Agriculture, Washington, DC, United States.
James ReecyDepartment of Animal Science, Iowa State University, Ames, IA, United States.
Derek BickhartDairy Forage Research Center, Agricultural Research Service, United States Department of Agriculture, Madison, WI, United States.
Harvey BlackburnNational Animal Germplasm Program, Agricultural Research Service, United States Department of Agriculture, Fort Collins, CO, United States.
Mark BoggessMeat Animal Research Center, Agricultural Research Service, United States Department of Agriculture, Clay Center, NE, United States.
Hans ChengAvian Disease and Oncology Laboratory, Agricultural Research Service, United States Department of Agriculture, East Lansing, MI, United States.
Archie ClutterAgricultural Research Division, University of Nebraska-Lincoln, Lincoln, NE, United States.
Noelle CockettPresident's Office, Utah State University, Logan, UT, United States.
Catherine ErnstDepartment of Animal Science, Michigan State University, East Lansing, MI, United States.
Janet E FultonHy-Line International, West Des Moines, IA, United States.
John LiuDepartment of Biology, College of Arts and Sciences, Syracuse University, Syracuse, NY, United States.
Joan LunneyAnimal Parasitic Diseases Laboratory, Agricultural Research Service, United States Department of Agriculture, Beltsville, MD, United States.
Holly NeibergsDepartment of Animal Sciences, Washington State University, Pullman, WA, United States.
Catherine PurcellDepartment of Commerce, National Oceanic and Atmospheric Administration, La Jolla, CA, United States.
Timothy P L SmithMeat Animal Research Center, Agricultural Research Service, United States Department of Agriculture, Clay Center, NE, United States.
Tad SonstegardAcceligen, A Recombinetics Company, St. Paul, MN, United States.
Jerry TaylorDivision of Animal Science, University of Missouri, Columbia, MO, United States.
Bhanu TeluguDepartment of Animal and Avian Sciences, University of Maryland, College Park, MD, United States.
Alison Van EenennaamDepartment of Animal Science, University of California, Davis, Davis, CA, United States.
Curtis P Van TassellAnimal Genomics and Improvement Laboratory, Agricultural Research Service, United States Department of Agriculture, Beltsville, MD, United States.
Kevin WellsAnimal Genomics and Improvement Laboratory, Agricultural Research Service, United States Department of Agriculture, Beltsville, MD, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In 2008, a consortium led by the Agricultural Research Service (ARS) and the National Institute for Food and Agriculture (NIFA) published the "Blueprint for USDA Efforts in Agricultural Animal Genomics 2008-2017," which served as a guiding document for research and funding in animal genomics. In the decade that followed, many of the goals set forth in the blueprint were accomplished. However, several other goals require further research. In addition, new topics not covered in the original blueprint, which are the result of emerging technologies, require exploration. To develop a new, updated blueprint, ARS and NIFA, along with scientists in the animal genomics field, convened a workshop titled "Genome to Phenome: A USDA Blueprint for Improving Animal Production" in November 2017, and these discussions were used to develop new goals for the next decade. Like the previous blueprint, these goals are grouped into the broad categories "Science to Practice," "Discovery Science," and "Infrastructure." New goals for characterizing the microbiome, enhancing the use of gene editing and other biotechnologies, and preserving genetic diversity are included in the new blueprint, along with updated goals within many genome research topics described in the previous blueprint. The updated blueprint that follows describes the vision, current state of the art, the research needed to advance the field, expected deliverables, and partnerships needed for each animal genomics research topic. Accomplishment of the goals described in the blueprint will significantly increase the ability to meet the demands for animal products by an increasing world population within the next decade.

Indexed as

animalbiotechnologydiscoverygenomicshealthinfrastructurephenotypeproduction

Identifiers

PMID31156693
PMCPMC6532451

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.