Evidence map›Paper›PMID 31156564›Full record

ArticleFrontiers in microbiology2019

Analysis of Nipah Virus Codon Usage and Adaptation to Hosts.

Rekha Khandia, Shailja Singhal, Utsang Kumar, Afzal Ansari, Ruchi Tiwari, Kuldeep Dhama, Jayashankar Das, Ashok Munjal, Raj Kumar Singh

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
13.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 168 citations in OpenAlex.

  1. Article
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  4. Analysis of Codon Usage Bias in theThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2026
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  17. Over time analysis of the codon usage of SARS-CoV-2 and its variants.Computational and structural biotechnology journal · 2025
    Article
  18. Article
  19. Article
  20. Article

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Rekha KhandiaDepartment of Biochemistry and Genetics, Barkatullah University, Bhopal, India.
Shailja SinghalDepartment of Biochemistry and Genetics, Barkatullah University, Bhopal, India.
Utsang KumarDepartment of Biochemistry and Genetics, Barkatullah University, Bhopal, India.
Afzal AnsariGujarat Biotechnology Research Centre (GBRC), Department of Science and Technology, Government of Gujarat, Gandhinagar, India.
Ruchi TiwariDepartment of Veterinary Microbiology and Immunology, College of Veterinary Uttar Pradesh Pandit Deen Dayal Upadhyaya Pashu Chikitsa Vigyan Vishwavidyalaya Evam Go Anusandhan Sansthan (DUVASU), Mathura, India.
Kuldeep DhamaDivision of Pathology, ICAR-Indian Veterinary Research Institute, Bareilly, India.
Jayashankar DasGujarat Biotechnology Research Centre (GBRC), Department of Science and Technology, Government of Gujarat, Gandhinagar, India.
Ashok MunjalDepartment of Biochemistry and Genetics, Barkatullah University, Bhopal, India.
Raj Kumar SinghICAR-Indian Veterinary Research Institute, Bareilly, India.
Barkatullah University · INGovernment of Gujarat · INIndian Veterinary Research Institute · INUttar Pradesh Pandit Deen Dayal Upadhyaya Pashu Chikitsa Vigyan Vishwavidyalaya Evam Go-Anusandhan Sansthan · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A recent outbreak of Nipah virus (NiV) in India has caused 17 deaths in people living in districts of Kerala state. Its zoonotic nature, as well as high rate of human-to-human transmission, has led researchers worldwide to work toward understanding the different aspects of the NiV. We performed a codon usage analysis, based on publicly available nucleotide sequences of NiV and its host adaptation, along with other members of the

Indexed as

CAIcodon usagecompositional constraintNipah virusRCDIselection pressuresimilarity index

Identifiers

PMID31156564
PMCPMC6530375
OpenAlexW2933062146

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.