Evidence map›Paper›PMID 31154983›Full record

ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2019

The role of mutation bias in adaptive molecular evolution: insights from convergent changes in protein function.

Jay F Storz, Chandrasekhar Natarajan, Anthony V Signore, Christopher C Witt, David M McCandlish, Arlin Stoltzfus

Open access · bronzeAbstract read
In one paragraph

Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
9.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 75 citations in OpenAlex.

  1. Emergence Biases in Molecular Evolution.Genome biology and evolution · 2026
    Review
  2. Article
  3. Article
  4. Module-Selection Balance in the Evolution of Modular Organisms.bioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
  7. Genetic and Epigenetic Changes inLife (Basel, Switzerland) · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Shifts in mutation spectra enhance access to beneficial mutations.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Mutation bias and the predictability of evolution.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Jay F Storz1 School of Biological Sciences, University of Nebraska , Lincoln, NE 68588 , USA.
Chandrasekhar Natarajan1 School of Biological Sciences, University of Nebraska , Lincoln, NE 68588 , USA.
Anthony V Signore1 School of Biological Sciences, University of Nebraska , Lincoln, NE 68588 , USA.
Christopher C Witt2 Department of Biology, University of New Mexico , Albuquerque, NM 87131 , USA.
David M McCandlish4 Cold Spring Harbor Laboratory , Cold Spring Harbor, NY 11724 , USA.
Arlin Stoltzfus5 Office of Data and Informatics, Material Measurement Laboratory, NIST, and Institute for Bioscience and Biotechnology Research , Rockville, MD 20850 , USA.
University of Nebraska–Lincoln · USCold Spring Harbor Laboratory · USMaterial Measurement Laboratory · USUniversity of New Mexico · US

Funding

Mutational Pleiotropy, Epistasis, and the Adaptive Evolution of Hemoglobin FunctionR01HL087216 · NHLBI · UNIVERSITY OF NEBRASKA LINCOLN · PI STORZ, JAY · 2008 to 2021
$4.5M
NHLBI NIH HHS R01 HL087216
6 · The paper itself

Abstract

An underexplored question in evolutionary genetics concerns the extent to which mutational bias in the production of genetic variation influences outcomes and pathways of adaptive molecular evolution. In the genomes of at least some vertebrate taxa, an important form of mutation bias involves changes at CpG dinucleotides: if the DNA nucleotide cytosine (C) is immediately 5' to guanine (G) on the same coding strand, then-depending on methylation status-point mutations at both sites occur at an elevated rate relative to mutations at non-CpG sites. Here, we examine experimental data from case studies in which it has been possible to identify the causative substitutions that are responsible for adaptive changes in the functional properties of vertebrate haemoglobin (Hb). Specifically, we examine the molecular basis of convergent increases in Hb-O

Indexed as

Evolution, MolecularAdaptation, PhysiologicalAltitudeAnimalsAvian ProteinsBirdsHemoglobinsOxygenPhylogenyPoint MutationAvian ProteinsHemoglobinsOxygenadaptationCpGhaemoglobinhigh altitudemutation biasprotein evolution

Identifiers

PMID31154983
PMCPMC6560279
OpenAlexW2922480775

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.