Evidence map›Paper›PMID 31154603›Full record

ArticleMolecular biology reports2019

Identification of novel rhesus macaque microRNAs from naïve whole blood.

Mary S Lopez, Jeanette M Metzger, Marina E Emborg

Open access · greenAbstract read
In one paragraph

Article in Molecular biology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 59% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Mary S LopezCellular and Molecular Pathology Graduate Program, University of Wisconsin-Madison, 1685 Highland Ave., Madison, WI, 53705, USA.ORCID http://orcid.org/0000-0003-3864-5480
Jeanette M MetzgerCellular and Molecular Pathology Graduate Program, University of Wisconsin-Madison, 1685 Highland Ave., Madison, WI, 53705, USA.ORCID http://orcid.org/0000-0001-6990-2668
Marina E EmborgCellular and Molecular Pathology Graduate Program, University of Wisconsin-Madison, 1685 Highland Ave., Madison, WI, 53705, USA. emborg@primate.wisc.edu.ORCID http://orcid.org/0000-0002-9351-6641
University of Wisconsin–Madison · US

Funding

WNPRC Supplemental Request for Nonhuman Primate Enclosures to Equip HIV/AIDS-Related Research FacilitiesP51OD011106 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI Dorota A. Grejner-Brzezinska · 2012 to 2026
$150.7M
Activation of PPAR-gamma in a Monkey Model of Cardiac DysautonomiaR21NS084158 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI EMBORG, MARINA · 2014 to 2015
$406k
ncRNAs and PPARy-Induced Sympathetic Neuroprotection in an NHP Model of Cardiac NeurodegenerationF31HL136047 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI METZGER, JEANETTE · 2017 to 2018
$63k
NHLBI NIH HHS F31 HL136047NHLBI NIH HHS F31HL136047NIH HHS P51 OD011106NIH HHS P51OD011106NINDS NIH HHS R21 NS084158
6 · The paper itself

Abstract

MicroRNAs (miRNAs) are emerging as novel molecular tools for diagnosing and treating diseases. Rhesus monkeys (Macaca mulatta) are the most widely used nonhuman primate species for biomedical studies, yet only 912 mature miRNAs have been identified in this species compared to 2654 in humans and 1978 in mice. The aim of this project was to help bridge that gap in knowledge by evaluating circulating miRNA in naïve rhesus monkeys and comparing results with currently available databases in different species in order to identify novel, mature miRNAs. Total RNA was isolated from whole blood of ten healthy, adult rhesus macaques. After performing next generation sequencing (NGS), 475 novel, mature miRNAs were identified in rhesus macaques for the first time; of those, 423 were identified for the first time in any species. The most abundantly expressed novel rhesus macaque miRNA, hsa-miR-744-5p, has previously been described in humans. Database assessment of hsa-miR-744-5p potential gene targets showed that while the gene targets showed > 90% sequence similarity between rhesus and humans, many did not share the same consensus sequences. The identification of 475 novel miRNAs in the blood of rhesus macaque reflects the complexity and variety of miRNAs across species. Further NGS studies are needed to reveal novel miRNA that will inform on species-, tissue-, and condition-specific miRNAs.

Indexed as

AnimalsCell-Free Nucleic AcidsGene Expression ProfilingHigh-Throughput Nucleotide SequencingMacaca mulattaMicroRNAsCell-Free Nucleic AcidsMicroRNAsMicroRNAMonkeysNext generation sequencingNon-coding RNARhesus

Identifiers

PMID31154603
PMCPMC6778012
OpenAlexW2947261960

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.