Evidence map›Paper›PMID 31153086›Full record

ReviewCurrent opinion in neurobiology2019

New subtypes of allele-specific epigenetic effects: implications for brain development, function and disease.

Stephanie N Kravitz, Christopher Gregg

Open access · greenAbstract readReview
In one paragraph

Review in Current opinion in neurobiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Random Allelic Expression in Inherited Retinal Disease Genes.Current issues in molecular biology · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Stephanie N KravitzDepartment of Neurobiology & Anatomy, University of Utah, Salt Lake City, UT 84132-3401, USA; Department of Human Genetics, University of Utah, Salt Lake City, UT 84132-3401, USA.
Christopher GreggDepartment of Neurobiology & Anatomy, University of Utah, Salt Lake City, UT 84132-3401, USA; Department of Human Genetics, University of Utah, Salt Lake City, UT 84132-3401, USA. Electronic address: chris.gregg@neuro.utah.edu.
University of Utah · US

Funding

The Nature and Function of Genomic Imprinting in Monoaminergic NeuronsR01MH109577 · NIMH · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI GREGG, CHRISTOPHER · 2016 to 2025
$5.6M
NRSA Training CoreTL1TR002540 · NCATS · UNIVERSITY OF UTAH · PI FAGERLIN, ANGELA, FAIRFAX, KEKE CELESTE · 2018 to 2022
$1.6M
Allelic regulatory mechanisms in the brainR21MH118570 · NIMH · UNIVERSITY OF UTAH · PI GREGG, CHRIS · 2019 to 2020
$419k
Functions and Mechanisms of Epigenetic Allelic Effects in the BrainR21MH120468 · NIMH · UNIVERSITY OF UTAH · PI GREGG, CHRIS · 2019 to 2020
$419k
NCATS NIH HHS TL1 TR002540NIMH NIH HHS R01 MH109577NIMH NIH HHS R21 MH118570NIMH NIH HHS R21 MH120468
6 · The paper itself

Abstract

Typically, it is assumed that the maternal and paternal alleles for most genes are equally expressed. Known exceptions include canonical imprinted genes, random X-chromosome inactivation, olfactory receptors and clustered protocadherins. Here, we highlight recent studies showing that allele-specific expression is frequent in the genome and involves subtypes of epigenetic allelic effects that differ in terms of heritability, clonality and stability over time. Different forms of epigenetic allele regulation could have different roles in brain development, function, and disease. An emerging area involves understanding allelic effects in a cell-type and developmental stage-specific manner and determining how these effects influence the impact of genetic variants and mutations on the brain. A deeper understanding of epigenetics at the allele and cellular level in the brain could help clarify the mechanisms underlying phenotypic variance.

Indexed as

Epigenesis, GeneticAllelesBrainGenomic ImprintingX Chromosome Inactivation

Identifiers

PMID31153086
PMCPMC7476552
OpenAlexW2946963029

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.