Evidence map›Paper›PMID 31152607›Full record

ArticleProteins2019

Modeling post-translational modifications and cancer-associated mutations that impact the heterochromatin protein 1α-importin α heterodimers.

Michael T Zimmermann, Monique M Williams, Eric W Klee, Gwen A Lomberk, Raul Urrutia

Abstract read
In one paragraph

Article in Proteins, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Michael T ZimmermannBioinformatics Research and Development Laboratory, and Precision Medicine Simulation Unit, Genomic Science and Precision Medicine Center (GSPMC), Medical College of Wisconsin, Milwaukee, Wisconsin.
Monique M WilliamsDepartment of Biochemistry, Mayo Clinic, Rochester, Minnesota.
Eric W KleeDepartment of Biochemistry, Mayo Clinic, Rochester, Minnesota.
Gwen A LomberkDivision of Research, Department of Surgery, Medical College of Wisconsin, Milwaukee, Wisconsin.
Raul UrrutiaDivision of Research, Department of Surgery, Medical College of Wisconsin, Milwaukee, Wisconsin.ORCID 0000-0002-1640-6780

Funding

ZINC FINGER GENES AND PANCREATIC CELL GROWTHR01DK052913 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI LOMBERK, GWEN, URRUTIA, RAUL A. · 1998 to 2023
$7.0M
Novel Experimental Therapeutics for Pancreatic CancerR01CA178627 · NCI · MEDICAL COLLEGE OF WISCONSIN · PI LOMBERK, GWEN · 2014 to 2018
$1.6M
NCI NIH HHS R01 CA178627NIDDK NIH HHS R01 DK052913NIDDK NIH HHS R01 DK52913
6 · The paper itself

Abstract

Heterochromatin protein 1α (HP1α) is a protein that mediates cancer-associated processes in the cell nucleus. Proteomic experiments, reported here, demonstrate that HP1α complexes with importin α (IMPα), a protein necessary for its nuclear transport. This data is congruent with Simple Linear Motif (SLiM) analyses that identify an IMPα-binding motif within the linker that joins the two globular domains of this protein. Using molecular modeling and dynamics simulations, we develop a model of the IMPα-HP1α complex and investigate the impact of phosphorylation and genomic variants on their interaction. We demonstrate that phosphorylation of the HP1α linker likely regulates its association with IMPα, which has implications for HP1α access to the nucleus, where it functions. Cancer-associated genomic variants do not abolish the interaction of HP1α but instead lead to rearrangements where the variant proteins maintain interaction with IMPα, but with less specificity. Combined, this new mechanistic insight bears biochemical, cell biological, and biomedical relevance.

Indexed as

MutationProtein Processing, Post-Translationalalpha KaryopherinsAmino Acid SequenceChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneHumansModels, MolecularNeoplasmsPhosphorylationProtein BindingProtein ConformationProtein MultimerizationSequence Alignmentalpha KaryopherinsCBX5 protein, humanChromobox Protein Homolog 5Chromosomal Proteins, Non-HistonecancerCBX5functional genomicsHP1αmolecular modeling

Identifiers

PMID31152607
PMCPMC6790107

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.