Evidence map›Paper›PMID 31152168›Full record

ArticleHuman molecular genetics2019

De novo loss-of-function KCNMA1 variants are associated with a new multiple malformation syndrome and a broad spectrum of developmental and neurological phenotypes.

Lina Liang, Xia Li, Sébastien Moutton, Samantha A Schrier Vergano, Benjamin Cogné, Anne Saint-Martin, Anna C E Hurst, Yushuang Hu, Olaf Bodamer, Julien Thevenon and 18 more

Open access · greenAbstract read
In one paragraph

Article in Human molecular genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 1 pooled it
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 1 synthesis or guideline pooled it, 90 citations in OpenAlex.

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  20. KCurrent neuropharmacology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 14 institutions in 4 countries.

Lina LiangKey Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Center for Human Genome Research, Cardio-X Institute, Huazhong University of Science and Technology, Wuhan, Hubei 430074, P. R. China.
Xia LiKey Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Center for Human Genome Research, Cardio-X Institute, Huazhong University of Science and Technology, Wuhan, Hubei 430074, P. R. China.
Sébastien MouttonCentre de Référence Anomalies du Développement et Syndromes Malformatifs, Hôpital d'Enfants, Dijon 21079, France.
Samantha A Schrier VerganoMedical Genetics and Metabolism, Children's Hospital of The King's Daughters, Eastern Virginia Medical School, Norfolk, VA 23507, USA.
Benjamin CognéService de Génétique Médicale, CHU de Nantes, Nantes 44093, France.
Anne Saint-MartinNeuropédiatrie, Centre de Référence des Epilepsies Rares, Hôpitaux Universitaires de Strasbourg, Strasbourg 67098, France.
Anna C E HurstDepartment of Genetics, University of Alabama at Birmingham, Birmingham, AL 35294, USA.
Yushuang HuKey Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Center for Human Genome Research, Cardio-X Institute, Huazhong University of Science and Technology, Wuhan, Hubei 430074, P. R. China.
Olaf BodamerDivision of Genetics and Genomics, Boston Children's Hospital/Harvard Medical School, Boston, MA 02115, USA.
Julien ThevenonCentre de Référence Anomalies du Développement et Syndromes Malformatifs, Hôpital d'Enfants, Dijon 21079, France.
Christina Y HungDivision of Genetics and Genomics, Boston Children's Hospital/Harvard Medical School, Boston, MA 02115, USA.
Bertrand IsidorService de Génétique Médicale, CHU de Nantes, Nantes 44093, France.
Bénédicte GerardInstitut de Génétique Médicale d'Alsace, Laboratoires de Diagnostic Génétique, Unité de Génétique Moléculaire, Nouvel Hôpital Civil, Strasbourg 67000, Franc.
Adelaide RegaPediatric Radiologist, Département de Radiologie et Imagerie Diagnostique et Thérapeutique, CHU, Dijon 21079, France.
Sophie NambotCentre de Référence Anomalies du Développement et Syndromes Malformatifs, Hôpital d'Enfants, Dijon 21079, France.
Daphné LehalleCentre de Référence Anomalies du Développement et Syndromes Malformatifs, Hôpital d'Enfants, Dijon 21079, France.
Yannis DuffourdCentre de Référence Anomalies du Développement et Syndromes Malformatifs, Hôpital d'Enfants, Dijon 21079, France.
Christel Thauvin-RobinetCentre de Référence Anomalies du Développement et Syndromes Malformatifs, Hôpital d'Enfants, Dijon 21079, France.
Laurence FaivreCentre de Référence Anomalies du Développement et Syndromes Malformatifs, Hôpital d'Enfants, Dijon 21079, France.
Stéphane BézieauService de Génétique Médicale, CHU de Nantes, Nantes 44093, France.
Leon S DureDepartment of Pediatrics and Neurology, University of Alabama at Birmingham, Birmingham, AL 35233, USA.
Daniel C HelblingClinical Services Laboratory, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
David BickClinical Services Laboratory, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.
Chengqi XuKey Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Center for Human Genome Research, Cardio-X Institute, Huazhong University of Science and Technology, Wuhan, Hubei 430074, P. R. China.
Qiuyun ChenDepartment of Cardiovascular and Metabolic Sciences, Lerner Research Institute, Department of Cardiovascular Medicine, Cleveland Clinic, Department of Molecular Medicine, Cleveland Clinic Lerner College of Medicine of Case Western Reserve University, Cleveland, OH 44195, USA.
Grazia M S ManciniDepartment of Clinical Genetics, Erasmus University Medical Center, Rotterdam 3015, The Netherlands.
Antonio VitobelloInserm UMR 1231 GAD team, Genetics of Developmental Disorders, Université de Bourgogne Franche-Comté, Dijon 21070, France.
Qing Kenneth WangKey Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Center for Human Genome Research, Cardio-X Institute, Huazhong University of Science and Technology, Wuhan, Hubei 430074, P. R. China.
Hôpital d'Enfants · FRHuazhong University of Science and Technology · CNBoston Children's Hospital · USCentre Hospitalier Universitaire de Nantes · FRCleveland Clinic Lerner College of Medicine · USHudsonAlpha Institute for Biotechnology · USUniversité de Bourgogne · FRUniversity of Alabama at Birmingham · USEastern Virginia Medical School · USErasmus MC · NLGénétique Médicale & Génomique Fonctionelle · FRHôpital Civil, Strasbourg · FRHôpitaux Universitaires de Strasbourg · FRInserm · FR

Funding

NGS in Large CAD Families: In-Depth Identification of Rare Risk Genomic VariantsR01HL121358 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI WANG, QING KENNETH · 2014 to 2017
$2.8M
Targeting Nav1.5 trafficking as a therapy for lethal genetic cardiac arrhythmiasR01HL126729 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI WANG, QING KENNETH · 2015 to 2018
$1.6M
Targeting a novel AGGF1 signaling pathway for therapy of pulmonary hypertensionR01HL138465 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI CHEN, QIUYUN, WANG, QING KENNETH · 2019 to 2019
$559k
NHLBI NIH HHS R01 HL121358NHLBI NIH HHS R01 HL126729NHLBI NIH HHS R01 HL138465
6 · The paper itself

Abstract

KCNMA1 encodes the large-conductance Ca2+- and voltage-activated K+ (BK) potassium channel α-subunit, and pathogenic gain-of-function variants in this gene have been associated with a dominant form of generalized epilepsy and paroxysmal dyskinesia. Here, we genetically and functionally characterize eight novel loss-of-function (LoF) variants of KCNMA1. Genome or exome sequencing and the participation in the international Matchmaker Exchange effort allowed for the identification of novel KCNMA1 variants. Patch clamping was used to assess functionality of mutant BK channels. The KCNMA1 variants p.(Ser351Tyr), p.(Gly356Arg), p.(Gly375Arg), p.(Asn449fs) and p.(Ile663Val) abolished the BK current, whereas p.(Cys413Tyr) and p.(Pro805Leu) reduced the BK current amplitude and shifted the activation curves toward positive potentials. The p.(Asp984Asn) variant reduced the current amplitude without affecting kinetics. A phenotypic analysis of the patients carrying the recurrent p.(Gly375Arg) de novo missense LoF variant revealed a novel syndromic neurodevelopmental disorder associated with severe developmental delay, visceral and cardiac malformations, connective tissue presentations with arterial involvement, bone dysplasia and characteristic dysmorphic features. Patients with other LoF variants presented with neurological and developmental symptoms including developmental delay, intellectual disability, ataxia, axial hypotonia, cerebral atrophy and speech delay/apraxia/dysarthria. Therefore, LoF KCNMA1 variants are associated with a new syndrome characterized by a broad spectrum of neurological phenotypes and developmental disorders. LoF variants of KCNMA1 cause a new syndrome distinctly different from gain-of-function variants in the same gene.

Indexed as

Loss of Function MutationPhenotypeAbnormalities, MultipleAllelesAmino Acid SubstitutionDevelopmental DisabilitiesElectrophysiological PhenomenaFemaleGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeHumansInfant, NewbornLarge-Conductance Calcium-Activated Potassium Channel alpha SubunitsMaleMutation, MissenseKCNMA1 protein, humanLarge-Conductance Calcium-Activated Potassium Channel alpha Subunits

Identifiers

PMID31152168
PMCPMC6735855
OpenAlexW2946891798

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.