Evidence map›Paper›PMID 31151413›Full record

ArticleBMC infectious diseases2019

Species, antibiotic susceptibility profiles and van gene frequencies among enterococci isolated from patients at Mulago National Referral Hospital in Kampala, Uganda.

David P Kateete, Moses Edolu, Edgar Kigozi, Jeffrey Kisukye, Hannington Baluku, Frank Nobert Mwiine, Christine F Najjuka

Abstract read
In one paragraph

Article in BMC infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Magnitude of vancomycin-resistantJAC-antimicrobial resistance · 2025
    Article
  5. Review
  6. Repurposing fusidic acid as an antimicrobial against enterococci with a low probability of resistance development.International microbiology : the official journal of the Spanish Society for Microbiology · 2024
    Article
  7. Article
  8. Article
  9. Detection of Antibiotic Resistance Genes (Archives of Razi Institute · 2023
    Article
  10. Antibiogram Pattern and Virulence Trait Characterization ofJournal of laboratory physicians · 2022
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

David P KateeteDepartment of Immunology and Molecular Biology, Makerere University College of Health Sciences, Kampala, Uganda. dkateete@chs.mak.ac.ug.ORCID http://orcid.org/0000-0001-8075-3069
Moses EdoluDepartment of Immunology and Molecular Biology, Makerere University College of Health Sciences, Kampala, Uganda.
Edgar KigoziDepartment of Immunology and Molecular Biology, Makerere University College of Health Sciences, Kampala, Uganda.
Jeffrey KisukyeDepartment of Medical Microbiology, Makerere University College of Health Sciences, Kampala, Uganda.
Hannington BalukuDepartment of Medical Microbiology, Makerere University College of Health Sciences, Kampala, Uganda.
Frank Nobert MwiineDepartment of Biomolecular Resources & Biolab Sciences, School of Biosecurity, Biotechnical & Laboratory Sciences, College of Veterinary Medicine, Animal Resources and Biosecurity, Makerere University, Kampala, Uganda.
Christine F NajjukaDepartment of Medical Microbiology, Makerere University College of Health Sciences, Kampala, Uganda. cnajjuka@chs.mak.ac.ug.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe increase in drug resistance to affordable antibiotics used to treat Gram positive bacterial infections has complicated the management of enterococcal infections. Resistance to vancomycin, one of the most powerful antibiotics, is of utmost concern as both intrinsic and acquired forms of resistance do occur in enterococci. This cross-sectional study aimed to determine the species, antibiotic susceptibility profiles and vanA/vanB gene frequencies among enterococci isolated from patients at Mulago Hospital in Kampala, Uganda.

methodsBetween November 2011 and October 2012, stool, urine, sputum and blood samples, as well as vaginal, endocervical, pus, ear and urethra swabs from 3229 patients were processed for isolation of bacteria, yielding 162 enterococci of which 115 were available for analysis (one isolate per specimen/patient). Species-level confirmation and susceptibility testing were determined with the Phoenix™ AST/ID Automated System, while vanA/vanB gene carriage was determined by PCR.

resultsSpecies-level identification revealed 72 isolates of E. faecalis, 20 E. gallinarum/casseliflavus, 5 E. faecium, 4 E. raffinosus and 2 isolates each for E. hirae and E. durans. Ten isolates could not be identified to species level. Antibiotic resistance was generally low especially to ampicillin, quinolones, nitrofurantoin, glycopeptides and linezolid, but high for erythromycin and tetracycline. Equally, vanA and vanB gene frequencies were low (i.e. 15.8 and 7.9%, respectively) and detected only in E. casseliflavus/gallinarum species that are intrinsically resistant to vancomycin. Vancomycin resistant isolates of E. faecalis and E. faecium were not detected.

conclusionsEnterococcus species are frequent in clinical specimens at Mulago Hospital but they are highly susceptible to common antibiotics especially ampicillin. While vancomycin resistant enterococcal (VRE) isolates of E. faecium and E. faecalis are rare in the hospital and frequency of multidrug resistance is low, non-faecium and non-faecalis VRE isolates (i.e. E. gallinarum/casseliflavus) are frequent, some with VanA/VanB (high-level) vancomycin resistance. Therefore, species-level identification of enterococci is necessary in resource limited settings to guide infection control and treatment of enterococcal infections.

Indexed as

AdultCarrier StateCross-Sectional StudiesFemaleGene FrequencyGram-Positive Bacterial InfectionsHumansMaleMicrobial Sensitivity TestsPolymerase Chain ReactionReferral and ConsultationSecondary Care CentersUgandaVancomycinVancomycin ResistanceVancomycin-Resistant EnterococciVancomycinEnterococcusEnterococcus faecalisEnterococcus faeciumKampala-UgandaMulago hospitalvanAvanBVancomyicin resistant enterococciVRE

Identifiers

PMID31151413
PMCPMC6545014

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.