Evidence map›Paper›PMID 31151205›Full record

ArticleInternational journal of molecular sciences2019

Molecular Characterization of Influenza Strains in Patients Admitted to Intensive Care Units during the 2017-2018 Season.

Antonio Piralla, Elena Pariani, Federica Giardina, Cristina Galli, Davide Sapia, Laura Pellegrinelli, Federica Novazzi, Giovanni Anselmi, Francesca Rovida, Francesco Mojoli and 3 more

Open access · goldAbstract readHistorical Article
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
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  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Antonio PirallaMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, 27100 Pavia, Italy. a.piralla@smatteo.pv.it.
Elena ParianiDepartment of Biomedical Sciences for Health, University of Milan, 20133 Milan, Italy. elena.pariani@unimi.it.ORCID 0000-0001-5681-3455
Federica GiardinaMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, 27100 Pavia, Italy. federica.giardina01@universitadipavia.it.
Cristina GalliDepartment of Biomedical Sciences for Health, University of Milan, 20133 Milan, Italy. cristina.galli@unimi.it.ORCID 0000-0002-0450-4156
Davide SapiaMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, 27100 Pavia, Italy. davide.sapia01@universitadipavia.it.
Laura PellegrinelliDepartment of Biomedical Sciences for Health, University of Milan, 20133 Milan, Italy. laura.pellegrinelli@unimi.it.ORCID 0000-0003-2344-6032
Federica NovazziMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, 27100 Pavia, Italy. novazzifederica@gmail.com.
Giovanni AnselmiDepartment of Biomedical Sciences for Health, University of Milan, 20133 Milan, Italy. giovanni.anselmi@unimi.it.
Francesca RovidaMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, 27100 Pavia, Italy. f.rovida@smatteo.pv.it.
Francesco MojoliDepartment of Clinical, Surgical, Diagnostic and Pediatric Sciences, University of Pavia, 27100 Pavia, Italy. francesco.mojoli@unipv.it.
Danilo CeredaDG Welfare, UO Prevenzione, Lombardy Region, 20124 Milan, Italy. Danilo_Cereda@regione.lombardia.it.
Sabrina SenatoreDG Welfare, UO Prevenzione, Lombardy Region, 20124 Milan, Italy. Sabrina_Senatore@regione.lombardia.it.
Fausto BaldantiMolecular Virology Unit, Microbiology and Virology Department, Fondazione IRCCS Policlinico San Matteo, 27100 Pavia, Italy. f.baldanti@smatteo.pv.it.
Policlinico San Matteo Fondazione · ITUniversity of Milan · ITRegione LombardiaUniversity of Pavia · IT

Funding

Ministero della Salute 80622Ministero della Salute GR-2013-02358399
6 · The paper itself

Abstract

This study aimed at assessing the frequency and the distribution of influenza virus types/subtypes in 172 laboratory-confirmed influenza-positive patients admitted to intensive care units (ICUs) during the 2017-2018 season in the Lombardy region (Northern Italy), and to investigate the presence of molecular pathogenicity markers. A total of 102/172 (59.3%) patients had influenza A infections (83 A/H1N1pdm09, 2 H3N2 and 17 were untyped), while the remaining 70/172 (40.7%) patients had influenza B infections. The 222G/N mutation in the hemagglutinin gene was identified in 33.3% (3/9) of A/H1N1pdm09 strains detected in the lower respiratory tract (LRT) samples and was also associated with more severe infections, whereas no peculiar mutations were observed for influenza B strains. A single-point evolution was observed in site 222 of A/H1N1pdm09 viruses, which might advantage viral evolution by favouring virus binding and replication in the lungs. Data from 17 paired upper respiratory tract (URT) and LRT samples showed that viral load in LRT samples was mostly higher than that detected in URT samples. Of note, influenza viruses were undetectable in 35% of paired URT samples. In conclusion, LRT samples appear to provide more accurate clinical information than URT samples, thus ensuring correct diagnosis and appropriate treatment of patients with severe respiratory infections requiring ICU admission.

Indexed as

Critical CareIntensive Care UnitsPatient AdmissionAdolescentAdultAgedAged, 80 and overChildChild, PreschoolFemaleHemagglutinin Glycoproteins, Influenza VirusHistory, 21st CenturyHumansInfantInfant, NewbornInfluenza A virusHemagglutinin Glycoproteins, Influenza Virusinfluenza virusintensive care unitlower respiratory tract infectionsevere respiratory infectionsviral load

Identifiers

PMID31151205
PMCPMC6600310
OpenAlexW2947668148

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.