Evidence map›Paper›PMID 31150530›Full record

ArticlePLoS pathogens2019

Chromulinavorax destructans, a pathogen of microzooplankton that provides a window into the enigmatic candidate phylum Dependentiae.

Christoph M Deeg, Matthias M Zimmer, Emma E George, Filip Husnik, Patrick J Keeling, Curtis A Suttle

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
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  3. International journal of systematic and evolutionary microbiology · 2025
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  17. Multiple energy sources and metabolic strategies sustain microbial diversity in Antarctic desert soils.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Article
  19. Exploring Changes in the Microbiota ofFrontiers in microbiology · 2021
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Christoph M DeegDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, Canada.ORCID 0000-0002-4459-9372
Matthias M ZimmerDepartment of Earth, Ocean and Atmospheric Sciences, University of British Columbia, Vancouver, Canada.
Emma E GeorgeDepartment of Botany, University of British Columbia, Vancouver, Canada.
Filip HusnikDepartment of Botany, University of British Columbia, Vancouver, Canada.ORCID 0000-0002-5381-0125
Patrick J KeelingDepartment of Botany, University of British Columbia, Vancouver, Canada.
Curtis A SuttleDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, Canada.
University of British Columbia · CAFisheries and Oceans Canada · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Members of the major candidate phylum Dependentiae (a.k.a. TM6) are widespread across diverse environments from showerheads to peat bogs; yet, with the exception of two isolates infecting amoebae, they are only known from metagenomic data. The limited knowledge of their biology indicates that they have a long evolutionary history of parasitism. Here, we present Chromulinavorax destructans (Strain SeV1) the first isolate of this phylum to infect a representative from a widespread and ecologically significant group of heterotrophic flagellates, the microzooplankter Spumella elongata (Strain CCAP 955/1). Chromulinavorax destructans has a reduced 1.2 Mb genome that is so specialized for infection that it shows no evidence of complete metabolic pathways, but encodes an extensive transporter system for importing nutrients and energy in the form of ATP from the host. Its replication causes extensive reorganization and expansion of the mitochondrion, effectively surrounding the pathogen, consistent with its dependency on the host for energy. Nearly half (44%) of the inferred proteins contain signal sequences for secretion, including many without recognizable similarity to proteins of known function, as well as 98 copies of proteins with an ankyrin-repeat domain; ankyrin-repeats are known effectors of host modulation, suggesting the presence of an extensive host-manipulation apparatus. These observations help to cement members of this phylum as widespread and diverse parasites infecting a broad range of eukaryotic microbes.

Indexed as

Genome, BacterialHost Microbial InteractionsAnimalsBacteriaChrysophytaPhylogenyZooplankton

Identifiers

PMID31150530
PMCPMC6561590
OpenAlexW2947736693

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.