Evidence map›Paper›PMID 31150430›Full record

ArticlePloS one2019

MicroRNA modulated networks of adaptive and innate immune response in pancreatic ductal adenocarcinoma.

Tainara F Felix, Rainer M Lopez Lapa, Márcio de Carvalho, Natália Bertoni, Tomas Tokar, Rogério A Oliveira, Maria A M Rodrigues, Cláudia N Hasimoto, Walmar K Oliveira, Leonardo Pelafsky and 9 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. [Prediction of immunotherapy targets for chronic cerebral hypoperfusion by bioinformatics method].Sheng wu yi xue gong cheng xue za zhi = Journal of biomedical engineering = Shengwu yixue gongchengxue zazhi · 2025
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Structure and Functions of HMGB3 Protein.International journal of molecular sciences · 2024
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 3 countries.

Tainara F FelixDepartment of Surgery and Orthopedics, Faculty of Medicine, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Rainer M Lopez LapaExperimental Research Unity (UNIPEX), Faculty of Medicine, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Márcio de CarvalhoDepartment of Veterinary Clinic, School of Veterinary Medicine and Animal Science, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Natália BertoniDepartment of Surgery and Orthopedics, Faculty of Medicine, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Tomas TokarKrembil Research Institute, University Health Network, Toronto, ON, Canada.
Rogério A OliveiraDepartment of Biostatistics, Institute of Biosciences, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Maria A M RodriguesDepartment of Pathology, Faculty of Medicine, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Cláudia N HasimotoDepartment of Surgery and Orthopedics, Faculty of Medicine, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Walmar K OliveiraDepartment of Surgery and Orthopedics, Faculty of Medicine, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Leonardo PelafskyDepartment of Surgery and Orthopedics, Faculty of Medicine, São Paulo State University (UNESP), Botucatu, SP, Brazil.
César T SpadellaDepartment of Surgery and Orthopedics, Faculty of Medicine, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Juan C LlanosDepartment of Surgery and Orthopedics, Faculty of Medicine, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Giovanni F SilvaDepartment of Clinics and Gastroenterology, Faculty of Medicine, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Wan L LamGenetics Unity, Integrative Oncology, British Columbia Cancer Center, Vancouver, BC, Canada.
Silvia Regina RogattoDepartment of Clinical Genetics, Vejle Hospital, Institute of Regional Health Research, University of Southern Denmark, Denmark, DK.
Luciana Schultz AmorimInstitute of Pathological Anatomy, Piracicaba, SP, Brazil.
Sandra A DrigoDepartment of Surgery and Orthopedics, Faculty of Medicine, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Robson F CarvalhoDepartment of Morphology, Institute of Biosciences, São Paulo State University (UNESP), Botucatu, SP, Brazil.
Patricia P ReisDepartment of Surgery and Orthopedics, Faculty of Medicine, São Paulo State University (UNESP), Botucatu, SP, Brazil.ORCID 0000-0003-3775-3797
Universidade Estadual Paulista (Unesp) · BRCentro Universitário de João Pessoa · BRBC Cancer Agency · CAUniversity Health Network · CAUniversity of Southern Denmark · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite progress in treatment strategies, only ~24% of pancreatic ductal adenocarcinoma (PDAC) patients survive >1 year. Our goal was to elucidate deregulated pathways modulated by microRNAs (miRNAs) in PDAC and Vater ampulla (AMP) cancers. Global miRNA expression was identified in 19 PDAC, 6 AMP and 25 paired, histologically normal pancreatic tissues using the GeneChip 4.0 miRNA arrays. Computational approaches were used for miRNA target prediction/identification of miRNA-regulated pathways. Target gene expression was validated in 178 pancreatic cancer and 4 pancreatic normal tissues from The Cancer Genome Atlas (TCGA). 20 miRNAs were significantly deregulated (FC≥2 and p<0.05) (15 down- and 5 up-regulated) in PDAC. miR-216 family (miR-216a-3p, miR-216a-5p, miR-216b-3p and miR-216b-5p) was consistently down-regulated in PDAC. miRNA-modulated pathways are associated with innate and adaptive immune system responses in PDAC. AMP cancers showed 8 down- and 1 up-regulated miRNAs (FDR p<0.05). Most enriched pathways (p<0.01) were RAS and Nerve Growth Factor signaling. PDAC and AMP display different global miRNA expression profiles and miRNA regulated networks/tumorigenesis pathways. The immune response was enriched in PDAC, suggesting the existence of immune checkpoint pathways more relevant to PDAC than AMP.

Indexed as

Adaptive ImmunityAdultAgedAmpulla of VaterCarcinoma, Pancreatic DuctalComputational BiologyDown-RegulationFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansImmunity, InnateMaleMicroRNAsMiddle AgedMicroRNAs

Identifiers

PMID31150430
PMCPMC6544344
OpenAlexW2946858220

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.