Evidence map›Paper›PMID 31149947›Full record

Observational studyAIDS (London, England)2019

HIV elite control is associated with reduced TRAILshort expression.

Ana C Paim, Nathan W Cummins, Sekar Natesampillai, Enrique Garcia-Rivera, Nicole Kogan, Ujjwal Neogi, Anders Sönnerborg, Maike Sperk, Gary D Bren, Steve Deeks and 2 more

Open access · greenAbstract readObservational Study
In one paragraph

Observational study in AIDS (London, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. The CD8Microbiology and molecular biology reviews : MMBR · 2021
    Review
  4. Human Cancers Express TRAILshort, a Dominant Negative TRAIL Splice Variant, Which Impairs Immune Effector Cell Killing of Tumor Cells.Clinical cancer research : an official journal of the American Association for Cancer Research · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Ana C PaimDivision of Infectious Diseases, Mayo Clinic, Rochester, Minnesota.
Nathan W CumminsDivision of Infectious Diseases, Mayo Clinic, Rochester, Minnesota.
Sekar NatesampillaiDivision of Infectious Diseases, Mayo Clinic, Rochester, Minnesota.
Enrique Garcia-RiveraNference, Cambridge, Massachusetts, USA.
Nicole KoganNference, Cambridge, Massachusetts, USA.
Ujjwal NeogiDivision of Clinical Microbiology, Karolinska Institutet, Stockholm, Sweden.
Anders SönnerborgDivision of Clinical Microbiology, Karolinska Institutet, Stockholm, Sweden.
Maike SperkDivision of Clinical Microbiology, Karolinska Institutet, Stockholm, Sweden.
Gary D BrenDivision of Infectious Diseases, Mayo Clinic, Rochester, Minnesota.
Steve DeeksDivision of Infectious Diseases, University of California, San Francisco, San Francisco, California.
Eric PolleyDivision of Biomedical Statistics and Informatics.
Andrew D BadleyDivision of Infectious Diseases, Mayo Clinic, Rochester, Minnesota.
Karolinska Institutet · SEWinnMed · USMayo Clinic · USNference (United States) · USUniversity of California, San Francisco · US

Funding

Viral reservoirs and sanctuaries in HAART - treated patients: role and mechanismsU19AI096109 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DEEKS, STEVEN GRANT · 2011 to 2015
$29.5M
Delaney AIDS Research Enterprise to Cure HIVUM1AI126611 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DEEKS, STEVEN GRANT, PICKER, LOUIS J. · 2016 to 2020
$27.9M
Prime shock and kill for HIV erradicationR01AI110173 · NIAID · MAYO CLINIC ROCHESTER · PI BADLEY, ANDREW D · 2014 to 2024
$6.9M
Evaluating the role of the novel apoptosis inhibitor TRAILshort, in maintaining HIV persistence.R01AI120698 · NIAID · MAYO CLINIC ROCHESTER · PI BADLEY, ANDREW D · 2015 to 2019
$2.5M
Evaluating the role of the novel apoptosis inhibitor TRAILshort, in maintaining HIV persistenceR56AI120698 · NIAID · MAYO CLINIC ROCHESTER · PI BADLEY, ANDREW D · 2021 to 2021
$607k
NIAID NIH HHS R01 AI110173NIAID NIH HHS R01 AI120698NIAID NIH HHS R56 AI120698NIAID NIH HHS U19 AI096109NIAID NIH HHS UM1 AI126611
6 · The paper itself

Abstract

objectiveTumor necrosis factor-related apoptosis-inducing ligand (TRAIL) dependent apoptosis has been implicated in CD4 T-cell death and immunologic control of HIV-1 infection. We have described a splice variant called TRAILshort, which is a dominant negative ligand that antagonizes TRAIL-induced cell death in the context of HIV-1 infection. HIV-1 elite controllers naturally control viral replication for largely unknown reasons. Since enhanced death of infected cells might be responsible, as might occur in situations of low (or inhibited) TRAILshort, we tested whether there was an association between elite controller status and reduced levels of TRAILshort expression.

designCohort study comparing TRAILshort and full length TRAIL expression between HIV-1 elite controllers and viremic progressors from two independent populations.

methodsTRAILshort and TRAIL gene expression in peripheral blood mononuclear cells (PBMCs) was determined by RNA-seq. TRAILshort and TRAIL protein expression in plasma was determined by antibody bead array and proximity extension assay respectively.

resultsHIV-1 elite controllers expressed less TRAILshort transcripts in PBMCs (P = 0.002) and less TRAILshort protein in plasma (P < 0.001) than viremic progressors.

conclusionReduced TRAILshort expression in PBMCs and plasma is associated with HIV-1 elite controller status.

Indexed as

AdultAgedCD4 Lymphocyte CountCD4-Positive T-LymphocytesFemaleHIV-1HIV InfectionsHumansLeukocytes, MononuclearMaleMiddle AgedProspective StudiesTNF-Related Apoptosis-Inducing LigandViremiaVirus ReplicationYoung AdultTNF-Related Apoptosis-Inducing LigandTNFSF10 protein, human

Identifiers

PMID31149947
PMCPMC6873462
OpenAlexW2947662703

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.