Evidence map›Paper›PMID 31149635›Full record

ArticleScience advances2019

Control of antiviral innate immune response by protein geranylgeranylation.

Shigao Yang, Alfred T Harding, Catherine Sweeney, David Miao, Gregory Swan, Connie Zhou, Zhaozhao Jiang, Katherine A Fitzgerald, Gianna Hammer, Martin O Bergo and 7 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Science advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 36 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 1 synthesis or guideline pooled it, 66 citations in OpenAlex.

  1. Pooled it
  2. N6-methyladenosine modification of FZR1 mRNA positively regulates antiviral innate immunity by targeting the MAVS-TRAF3/6 axis.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 3 countries.

Shigao YangDivision of Rheumatology and Immunology, Department of Medicine, Duke University School of Medicine, 207 Research Drive, Durham, NC 27710, USA.ORCID 0000-0003-2717-6914
Alfred T HardingDepartment of Molecular Genetics and Microbiology, Duke University School of Medicine, 207 Research Drive, Durham, NC 27710, USA.ORCID 0000-0002-1446-2359
Catherine SweeneyDivision of Rheumatology and Immunology, Department of Medicine, Duke University School of Medicine, 207 Research Drive, Durham, NC 27710, USA.
David MiaoDivision of Rheumatology and Immunology, Department of Medicine, Duke University School of Medicine, 207 Research Drive, Durham, NC 27710, USA.
Gregory SwanDivision of Rheumatology and Immunology, Department of Medicine, Duke University School of Medicine, 207 Research Drive, Durham, NC 27710, USA.ORCID 0000-0002-8038-3851
Connie ZhouDivision of Rheumatology and Immunology, Department of Medicine, Duke University School of Medicine, 207 Research Drive, Durham, NC 27710, USA.ORCID 0000-0002-0099-0628
Zhaozhao JiangDivision of Infectious Diseases and Immunology, Department of Medicine, University of Massachusetts Medical School, 364 Plantation Street, Worcester, MA 01605, USA.
Katherine A FitzgeraldDivision of Infectious Diseases and Immunology, Department of Medicine, University of Massachusetts Medical School, 364 Plantation Street, Worcester, MA 01605, USA.
Gianna HammerDepartment of Immunology, Duke University School of Medicine, 207 Research Drive, Durham, NC 27710, USA.
Martin O BergoKarolinska Institute, Department of Biosciences and Nutrition, NEO Building 6th Floor, SE-141 83 Huddinge, Sweden.
Heather K KrohDepartment of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, 1161 21st Avenue South, Nashville, TN 37232, USA.
D Borden LacyDepartment of Pathology, Microbiology and Immunology, Vanderbilt University School of Medicine, 1161 21st Avenue South, Nashville, TN 37232, USA.ORCID 0000-0003-2273-8121
Chunxiang SunFaculty of Dentistry, University of Toronto, 150 College Street, Ontario, M5S 3E2, Canada.
Michael GlogauerFaculty of Dentistry, University of Toronto, 150 College Street, Ontario, M5S 3E2, Canada.
Loretta G QueDivision of Pulmonary, Allergy and Critical Care Medicine, Department of Medicine, Duke University School of Medicine, 207 Research Drive, Durham, NC 27710, USA.ORCID 0000-0001-9188-9244
Nicholas S HeatonDepartment of Molecular Genetics and Microbiology, Duke University School of Medicine, 207 Research Drive, Durham, NC 27710, USA.
Donghai WangDivision of Rheumatology and Immunology, Department of Medicine, Duke University School of Medicine, 207 Research Drive, Durham, NC 27710, USA.ORCID 0000-0003-4273-6115
Duke University · USUniversity of Massachusetts Chan Medical School · USUniversity of Toronto · CAVanderbilt University · USKarolinska Institutet · SE

Funding

Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
Viral Oncology Training GrantT32CA009111 · NCI · DUKE UNIVERSITY · PI LUFTIG, MICAH A. · 1985 to 2023
$8.9M
Structural mechanisms of Clostridium difficile pathogenesisR01AI095755 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI LACY, DANA BORDEN · 2011 to 2020
$3.9M
Structural Mechanisms of Clostridioides difficile pathogenesisR37AI095755 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Dana Borden Lacy · 2021 to 2026
$3.2M
Censoring Inflammation by Protein GeranylgeranylationR01AI110695 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI WANG, DONGHAI · 2015 to 2019
$2.1M
BLRD VA I01 BX002943NCI NIH HHS T32 CA009111NIAID NIH HHS R01 AI110695NIAID NIH HHS R37 AI095755NIDDK NIH HHS P30 DK058404
6 · The paper itself

Abstract

The mitochondrial antiviral signaling protein (MAVS) orchestrates host antiviral innate immune response to RNA virus infection. However, how MAVS signaling is controlled to eradicate virus while preventing self-destructive inflammation remains obscure. Here, we show that protein geranylgeranylation, a posttranslational lipid modification of proteins, limits MAVS-mediated immune signaling by targeting Rho family small guanosine triphosphatase Rac1 into the mitochondria-associated endoplasmic reticulum (ER) membranes (MAMs) at the mitochondria-ER junction. Protein geranylgeranylation and subsequent palmitoylation promote Rac1 translocation into MAMs upon viral infection. MAM-localized Rac1 limits MAVS' interaction with E3 ligase Trim31 and hence inhibits MAVS ubiquitination, aggregation, and activation. Rac1 also facilitates the recruitment of caspase-8 and cFLIP

Indexed as

Adaptor Proteins, Signal TransducingAlkyl and Aryl TransferasesAnimalsEndoplasmic ReticulumFemaleHumansImmunity, InnateMacrophages, AlveolarMaleMice, KnockoutNeuropeptidesOrthomyxoviridae InfectionsProtein Prenylationrac1 GTP-Binding ProteinRAC2 GTP-Binding Proteinrac GTP-Binding ProteinsAdaptor Proteins, Signal TransducingAlkyl and Aryl Transferasesgeranylgeranyltransferase type-IMAVS protein, mouseNeuropeptidesrac1 GTP-Binding ProteinRac1 protein, mouseRAC2 GTP-Binding Proteinrac GTP-Binding ProteinsReceptor-Interacting Protein Serine-Threonine KinasesRipk1 protein, mouseTRIM31 protein, mouseTripartite Motif ProteinsUbiquitin-Protein Ligases

Identifiers

PMID31149635
PMCPMC6541464
OpenAlexW2947495774

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.