Evidence map›Paper›PMID 31147818›Full record

ArticleInternational journal of computer assisted radiology and surgery2019

Spatio-temporal deep learning models for tip force estimation during needle insertion.

Nils Gessert, Torben Priegnitz, Thore Saathoff, Sven-Thomas Antoni, David Meyer, Moritz Franz Hamann, Klaus-Peter Jünemann, Christoph Otte, Alexander Schlaefer

Open access · hybridAbstract read
In one paragraph

Article in International journal of computer assisted radiology and surgery, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Needle tip force estimation by deep learning from raw spectral OCT data.International journal of computer assisted radiology and surgery · 2020
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Nils GessertInstitute of Medical Technology, Hamburg University of Technology, Hamburg, Germany. nils.gessert@tuhh.de.ORCID http://orcid.org/0000-0001-6325-5092
Torben PriegnitzInstitute of Medical Technology, Hamburg University of Technology, Hamburg, Germany.
Thore SaathoffInstitute of Medical Technology, Hamburg University of Technology, Hamburg, Germany.
Sven-Thomas AntoniInstitute of Medical Technology, Hamburg University of Technology, Hamburg, Germany.
David MeyerDepartment of Urology, University Hospital Schleswig-Holstein, Kiel, Germany.
Moritz Franz HamannDepartment of Urology, University Hospital Schleswig-Holstein, Kiel, Germany.
Klaus-Peter JünemannDepartment of Urology, University Hospital Schleswig-Holstein, Kiel, Germany.
Christoph OtteInstitute of Medical Technology, Hamburg University of Technology, Hamburg, Germany.
Alexander SchlaeferInstitute of Medical Technology, Hamburg University of Technology, Hamburg, Germany.
Universität Hamburg · DEUniversity Hospital Schleswig-Holstein · DE

Funding

Deutsche Forschungsgemeinschaft SCHL 1844/2-1Deutsche Forschungsgemeinschaft SCHL 1844/2-2
6 · The paper itself

Abstract

purposePrecise placement of needles is a challenge in a number of clinical applications such as brachytherapy or biopsy. Forces acting at the needle cause tissue deformation and needle deflection which in turn may lead to misplacement or injury. Hence, a number of approaches to estimate the forces at the needle have been proposed. Yet, integrating sensors into the needle tip is challenging and a careful calibration is required to obtain good force estimates.

methodsWe describe a fiber-optic needle tip force sensor design using a single OCT fiber for measurement. The fiber images the deformation of an epoxy layer placed below the needle tip which results in a stream of 1D depth profiles. We study different deep learning approaches to facilitate calibration between this spatio-temporal image data and the related forces. In particular, we propose a novel convGRU-CNN architecture for simultaneous spatial and temporal data processing.

resultsThe needle can be adapted to different operating ranges by changing the stiffness of the epoxy layer. Likewise, calibration can be adapted by training the deep learning models. Our novel convGRU-CNN architecture results in the lowest mean absolute error of [Formula: see text] and a cross-correlation coefficient of 0.9997 and clearly outperforms the other methods. Ex vivo experiments in human prostate tissue demonstrate the needle's application.

conclusionsOur OCT-based fiber-optic sensor presents a viable alternative for needle tip force estimation. The results indicate that the rich spatio-temporal information included in the stream of images showing the deformation throughout the epoxy layer can be effectively used by deep learning models. Particularly, we demonstrate that the convGRU-CNN architecture performs favorably, making it a promising approach for other spatio-temporal learning problems.

Indexed as

Deep LearningNeedlesTomography, Optical CoherenceAlgorithmsBiopsyBrachytherapyCalibrationEquipment DesignHumansMechanical PhenomenaConvolutional GRUConvolution neural networkForce estimationNeedle placementOptical coherence tomography

Identifiers

PMID31147818
PMCPMC6785597
OpenAlexW2946153601

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.