Evidence map›Paper›PMID 31147717›Full record

ArticleNucleic acids research2019

Highly efficient editing of the β-globin gene in patient-derived hematopoietic stem and progenitor cells to treat sickle cell disease.

So Hyun Park, Ciaran M Lee, Daniel P Dever, Timothy H Davis, Joab Camarena, Waracharee Srifa, Yankai Zhang, Alireza Paikari, Alicia K Chang, Matthew H Porteus and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed, 1 pooled it
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 1 synthesis or guideline pooled it, 149 citations in OpenAlex.

  1. Pooled it
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  14. Article
  15. Genome editing strategies for targeted correction of β-globin mutation in sickle cell disease: From bench to bedside.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
  16. Article
  17. Article
  18. Review
  19. Safety and efficacy studies of CRISPR-Cas9 treatment of sickle cell disease highlights disease-specific responses.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  20. CRISPR/Cas9-Editing K562 Cell Line as a Potential Tool in Transfusion Applications: Knockout of Vel Antigen Gene.Transfusion medicine and hemotherapy : offizielles Organ der Deutschen Gesellschaft fur Transfusionsmedizin und Immunhamatologie · 2024
    Article

37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

So Hyun ParkDepartment of Bioengineering, Rice University, Houston, TX 77030, USA.
Ciaran M LeeDepartment of Bioengineering, Rice University, Houston, TX 77030, USA.
Daniel P DeverDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Timothy H DavisDepartment of Bioengineering, Rice University, Houston, TX 77030, USA.
Joab CamarenaDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Waracharee SrifaDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Yankai ZhangTexas Children's Hematology Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA.
Alireza PaikariTexas Children's Hematology Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA.
Alicia K ChangTexas Children's Hematology Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA.
Matthew H PorteusDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Vivien A SheehanTexas Children's Hematology Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA.
Gang BaoDepartment of Bioengineering, Rice University, Houston, TX 77030, USA.
Baylor College of Medicine · USRice University · USStanford University · US

Funding

Hematology Training ProgramT32DK060445 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI GOODELL, MARGARET A. · 2002 to 2023
$8.3M
A Genomics Approach to Gamma-Globin RegulationK08DK110448 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI SHEEHAN, VIVIEN ANDREA · 2016 to 2019
$616k
NIDDK NIH HHS K08 DK110448NIDDK NIH HHS T32 DK060445
6 · The paper itself

Abstract

Sickle cell disease (SCD) is a monogenic disorder that affects millions worldwide. Allogeneic hematopoietic stem cell transplantation is the only available cure. Here, we demonstrate the use of CRISPR/Cas9 and a short single-stranded oligonucleotide template to correct the sickle mutation in the β-globin gene in hematopoietic stem and progenitor cells (HSPCs) from peripheral blood or bone marrow of patients with SCD, with 24.5 ± 7.6% efficiency without selection. Erythrocytes derived from gene-edited cells showed a marked reduction of sickle cells, with the level of normal hemoglobin (HbA) increased to 25.3 ± 13.9%. Gene-corrected SCD HSPCs retained the ability to engraft when transplanted into non-obese diabetic (NOD)-SCID-gamma (NSG) mice with detectable levels of gene correction 16-19 weeks post-transplantation. We show that, by using a high-fidelity SpyCas9 that maintained the same level of on-target gene modification, the off-target effects including chromosomal rearrangements were significantly reduced. Taken together, our results demonstrate efficient gene correction of the sickle mutation in both peripheral blood and bone marrow-derived SCD HSPCs, a significant reduction in sickling of red blood cells, engraftment of gene-edited SCD HSPCs in vivo and the importance of reducing off-target effects; all are essential for moving genome editing based SCD treatment into clinical practice.

Indexed as

Anemia, Sickle CellAnimalsbeta-GlobinsCell Line, TumorCells, CulturedCRISPR-Cas SystemsErythrocytesGene EditingGenetic TherapyHematopoietic Stem CellsHematopoietic Stem Cell TransplantationHumansK562 CellsMiceMice, Inbred NODMice, Knockoutbeta-Globins

Identifiers

PMID31147717
PMCPMC6735704
OpenAlexW2947116880

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.