Evidence map›Paper›PMID 31147711›Full record

ArticleNucleic acids research2019

A Drosophila cell-free system that senses DNA breaks and triggers phosphorylation signalling.

Lisa Harpprecht, Sandro Baldi, Tamas Schauer, Andreas Schmidt, Tanja Bange, Maria S Robles, Elisabeth Kremmer, Axel Imhof, Peter B Becker

Abstract read
In one paragraph

Article in Nucleic acids research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Lisa HarpprechtMolecular Biology Division, Biomedical Center, LMU Munich, 82152 Planegg-Martinsried, Germany.
Sandro BaldiMolecular Biology Division, Biomedical Center, LMU Munich, 82152 Planegg-Martinsried, Germany.
Tamas SchauerMolecular Biology Division, Biomedical Center, LMU Munich, 82152 Planegg-Martinsried, Germany.
Andreas SchmidtMolecular Biology Division, Biomedical Center, LMU Munich, 82152 Planegg-Martinsried, Germany.
Tanja BangeInstitute of Medical Psychology, LMU Munich, 80336 Munich, Germany.
Maria S RoblesInstitute of Medical Psychology, LMU Munich, 80336 Munich, Germany.
Elisabeth KremmerInstitute of Molecular Immunology, German Research Center for Environmental Health, 81377 Munich, Germany.
Axel ImhofMolecular Biology Division, Biomedical Center, LMU Munich, 82152 Planegg-Martinsried, Germany.
Peter B BeckerMolecular Biology Division, Biomedical Center, LMU Munich, 82152 Planegg-Martinsried, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Preblastoderm Drosophila embryo development is characterized by fast cycles of nuclear divisions. Extracts from these embryos can be used to reconstitute complex chromatin with high efficiency. We now discovered that this chromatin assembly system contains activities that recognize unprotected DNA ends and signal DNA damage through phosphorylation. DNA ends are initially bound by Ku and MRN complexes. Within minutes, the phosphorylation of H2A.V (homologous to γH2A.X) initiates from DNA breaks and spreads over tens of thousands DNA base pairs. The γH2A.V phosphorylation remains tightly associated with the damaged DNA and does not spread to undamaged DNA in the same reaction. This first observation of long-range γH2A.X spreading along damaged chromatin in an in vitro system provides a unique opportunity for mechanistic dissection. Upon further incubation, DNA ends are rendered single-stranded and bound by the RPA complex. Phosphoproteome analyses reveal damage-dependent phosphorylation of numerous DNA-end-associated proteins including Ku70, RPA2, CHRAC16, the exonuclease Rrp1 and the telomer capping complex. Phosphorylation of spindle assembly checkpoint components and of microtubule-associated proteins required for centrosome integrity suggests this cell-free system recapitulates processes involved in the regulated elimination of fatally damaged syncytial nuclei.

Indexed as

DNA BreaksSignal TransductionAnimalsCell-Free SystemCell LineChromatinDNA RepairDrosophilaDrosophila ProteinsHistonesKu AutoantigenPhosphorylationProteomeProteomicsChromatinDrosophila ProteinsHis2Av protein, DrosophilaHistonesKu AutoantigenProteome

Identifiers

PMID31147711
PMCPMC6698661

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.