Evidence map›Paper›PMID 31147550›Full record

ArticleNature communications2019

A bioactive mammalian disaccharide associated with autoimmunity activates STING-TBK1-dependent immune response.

Charles S Fermaintt, Kanae Sano, Zhida Liu, Nozomi Ishii, Junichi Seino, Nicole Dobbs, Tadashi Suzuki, Yang-Xin Fu, Mark A Lehrman, Ichiro Matsuo and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Organellar homeostasis and innate immune sensing.Nature reviews. Immunology · 2022
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Charles S FermainttDepartment of Immunology, University of Texas Southwestern Medical Center, Dallas, TX, 75390, USA.
Kanae SanoDivision of Molecular Science, Gunma University, Maebashi, 371-8510, Japan.
Zhida LiuDepartment of Pathology, University of Texas Southwestern Medical Center, Dallas, TX, 75390, USA.
Nozomi IshiiDivision of Molecular Science, Gunma University, Maebashi, 371-8510, Japan.
Junichi SeinoGlycometabolic Biochemistry Laboratory, RIKEN Cluster for Pioneering Research, Wako, 351-0198, Japan.
Nicole DobbsDepartment of Immunology, University of Texas Southwestern Medical Center, Dallas, TX, 75390, USA.
Tadashi SuzukiGlycometabolic Biochemistry Laboratory, RIKEN Cluster for Pioneering Research, Wako, 351-0198, Japan.
Yang-Xin FuDepartment of Pathology, University of Texas Southwestern Medical Center, Dallas, TX, 75390, USA.ORCID http://orcid.org/0000-0002-4809-825X
Mark A LehrmanDepartment of Pharmacology, Department of Microbiology, University of Texas Southwestern Medical Center, Dallas, TX, 75390, USA.
Ichiro MatsuoDivision of Molecular Science, Gunma University, Maebashi, 371-8510, Japan.ORCID http://orcid.org/0000-0003-0740-1184
Nan YanDepartment of Immunology, University of Texas Southwestern Medical Center, Dallas, TX, 75390, USA. nan.yan@utsouthwestern.edu.ORCID http://orcid.org/0000-0002-0637-3989
The University of Texas Southwestern Medical Center · USGunma University · JPPioneer (Japan) · JPSouthwestern Medical Center · US

Funding

The N-Glycosylation Pathway And Signaling By Free Mannose-6-PhosphateR01GM038545 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI LEHRMAN, MARK · 1987 to 2017
$5.7M
A DNase-Independent Function of TREX1/DNase III in Systemic Lupus ErythematosusR01AR067135 · NIAMS · UT SOUTHWESTERN MEDICAL CENTER · PI YAN, NAN · 2014 to 2018
$1.8M
STING Trafficking, Activation and Signaling Beyond InterferonR56AI134877 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI YAN, NAN · 2018 to 2018
$405k
N-Glycosylation And ER StressR56GM038545 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI LEHRMAN, MARK · 2008 to 2008
$385k
Lupus Research Alliance (Lupus Research Alliance, Inc.) 585101NIAID NIH HHS R56 AI134877NIAMS NIH HHS R01 AR067135NIGMS NIH HHS R01 GM038545NIGMS NIH HHS R56 GM038545U.S. Department of Health & Human Services | NIH | National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS) AR067135U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) GM038545Welch Foundation I-1831
6 · The paper itself

Abstract

Glycans from microbial pathogens are well known pathogen-associated molecular patterns that are recognized by the host immunity; however, little is known about whether and how mammalian self-glycans activate the host immune response, especially in the context of autoimmune disease. Using biochemical fractionation and two-dimensional HPLC, we identify an abundant and bioactive free glycan, the Manβ1-4GlcNAc disaccharide in TREX1-associated autoimmune diseases. We report that both monosaccharide residues and the β1-4 linkage are critical for bioactivity of this disaccharide. We also show that Manβ1-4GlcNAc is produced by oligosaccharyltransferase hydrolysis of lipid-linked oligosaccharides in the ER lumen, followed by ENGase and mannosidase processing in the cytosol and lysosomes. Furthermore, synthetic Manβ1-4GlcNAc disaccharide stimulates a broad immune response in vitro, which is in part dependent on the STING-TBK1 pathway, and enhances antibody response in vivo. Together, our data identify Manβ1-4GlcNAc as a novel innate immune modulator associated with chronic autoimmune diseases.

Indexed as

AnimalsAutoimmune DiseasesAutoimmunityDisaccharidesDisease Models, AnimalEndoplasmic ReticulumExodeoxyribonucleasesFibroblastsImmunity, InnateMembrane ProteinsMicePhosphoproteinsProtein Serine-Threonine KinasesRAW 264.7 CellsSTING Protein4-O-mannopyranosyl-2-acetamido-2-deoxyglucoseDisaccharidesExodeoxyribonucleasesMembrane ProteinsPhosphoproteinsProtein Serine-Threonine KinasesSting1 protein, mouseSTING ProteinTbk1 protein, mousethree prime repair exonuclease 1

Identifiers

PMID31147550
PMCPMC6542856
OpenAlexW2947795259

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.