Evidence map›Paper›PMID 31147467›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

A neural network protocol for electronic excitations of

Sheng Ye, Wei Hu, Xin Li, Jinxiao Zhang, Kai Zhong, Guozhen Zhang, Yi Luo, Shaul Mukamel, Jun Jiang

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Machine learning recognition of protein secondary structures based on two-dimensional spectroscopic descriptors.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. AI-based spectroscopic monitoring of real-time interactions between SARS-CoV-2 and human ACE2.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  14. Review
  15. Article
  16. Article
  17. Machine Learning for Absorption Cross Sections.The journal of physical chemistry. A · 2020
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sheng YeHefei National Laboratory for Physical Sciences at the Microscale, Chinese Academy of Sciences Center for Excellence in Nanoscience, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China.
Wei HuShandong Provincial Key Laboratory of Molecular Engineering, School of Chemistry and Pharmaceutical Engineering, Qilu University of Technology, Jinan, 250353 Shandong, People's Republic of China.
Xin LiHefei National Laboratory for Physical Sciences at the Microscale, Chinese Academy of Sciences Center for Excellence in Nanoscience, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China.
Jinxiao ZhangHefei National Laboratory for Physical Sciences at the Microscale, Chinese Academy of Sciences Center for Excellence in Nanoscience, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China.
Kai ZhongHefei National Laboratory for Physical Sciences at the Microscale, Chinese Academy of Sciences Center for Excellence in Nanoscience, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China.
Guozhen ZhangHefei National Laboratory for Physical Sciences at the Microscale, Chinese Academy of Sciences Center for Excellence in Nanoscience, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China.ORCID 0000-0003-0125-9666
Yi LuoHefei National Laboratory for Physical Sciences at the Microscale, Chinese Academy of Sciences Center for Excellence in Nanoscience, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China.
Shaul MukamelDepartment of Chemistry, University of California, Irvine, CA 92697; smukamel@uci.edu jiangj1@ustc.edu.cn.ORCID 0000-0002-6015-3135
Jun JiangHefei National Laboratory for Physical Sciences at the Microscale, Chinese Academy of Sciences Center for Excellence in Nanoscience, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, People's Republic of China; smukamel@uci.edu jiangj1@ustc.edu.cn.ORCID 0000-0002-6116-5605

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

UV absorption is widely used for characterizing proteins structures. The mapping of UV spectra to atomic structure of proteins relies on expensive theoretical simulations, circumventing the heavy computational cost which involves repeated quantum-mechanical simulations of excited-state properties of many fluctuating protein geometries, which has been a long-time challenge. Here we show that a neural network machine-learning technique can predict electronic absorption spectra of

Indexed as

machine learningneural networkprotein peptide bondUV photoabsorption

Identifiers

PMID31147467
PMCPMC6575560

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.