Evidence map›Paper›PMID 31146762›Full record

ArticleMalaria journal2019

Using mid-infrared spectroscopy and supervised machine-learning to identify vertebrate blood meals in the malaria vector, Anopheles arabiensis.

Emmanuel P Mwanga, Salum A Mapua, Doreen J Siria, Halfan S Ngowo, Francis Nangacha, Joseph Mgando, Francesco Baldini, Mario González Jiménez, Heather M Ferguson, Klaas Wynne and 3 more

Abstract read
In one paragraph

Article in Malaria journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  7. Advancing age grading techniques forBiology methods & protocols · 2024
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  15. Podoconiosis: key priorities for research and implementation.Transactions of the Royal Society of Tropical Medicine and Hygiene · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Emmanuel P MwangaEnvironmental Health and Ecological Science Thematic Group, Ifakara Health Institute, Morogoro, Tanzania. emwanga@ihi.or.tz.ORCID http://orcid.org/0000-0003-1799-3830
Salum A MapuaEnvironmental Health and Ecological Science Thematic Group, Ifakara Health Institute, Morogoro, Tanzania.
Doreen J SiriaEnvironmental Health and Ecological Science Thematic Group, Ifakara Health Institute, Morogoro, Tanzania.
Halfan S NgowoEnvironmental Health and Ecological Science Thematic Group, Ifakara Health Institute, Morogoro, Tanzania.
Francis NangachaEnvironmental Health and Ecological Science Thematic Group, Ifakara Health Institute, Morogoro, Tanzania.
Joseph MgandoEnvironmental Health and Ecological Science Thematic Group, Ifakara Health Institute, Morogoro, Tanzania.
Francesco BaldiniInstitute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, G12 8QQ, UK.
Mario González JiménezSchool of Chemistry, University of Glasgow, Glasgow, G12 8QQ, UK.
Heather M FergusonInstitute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, G12 8QQ, UK.
Klaas WynneSchool of Chemistry, University of Glasgow, Glasgow, G12 8QQ, UK.
Prashanth SelvarajInstitute for Disease Modeling, Bellevue, WA, 98005, USA.
Simon A BabayanInstitute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, G12 8QQ, UK.
Fredros O OkumuEnvironmental Health and Ecological Science Thematic Group, Ifakara Health Institute, Morogoro, Tanzania.

Funding

Howard Hughes Medical Institute Grant No. OPP1099295Medical Research Council MR/P025501/1Wellcome TrustWellcome Trust WT102350/Z/13/Z
6 · The paper itself

Abstract

backgroundThe propensity of different Anopheles mosquitoes to bite humans instead of other vertebrates influences their capacity to transmit pathogens to humans. Unfortunately, determining proportions of mosquitoes that have fed on humans, i.e. Human Blood Index (HBI), currently requires expensive and time-consuming laboratory procedures involving enzyme-linked immunosorbent assays (ELISA) or polymerase chain reactions (PCR). Here, mid-infrared (MIR) spectroscopy and supervised machine learning are used to accurately distinguish between vertebrate blood meals in guts of malaria mosquitoes, without any molecular techniques.

methodsLaboratory-reared Anopheles arabiensis females were fed on humans, chickens, goats or bovines, then held for 6 to 8 h, after which they were killed and preserved in silica. The sample size was 2000 mosquitoes (500 per host species). Five individuals of each host species were enrolled to ensure genotype variability, and 100 mosquitoes fed on each. Dried mosquito abdomens were individually scanned using attenuated total reflection-Fourier transform infrared (ATR-FTIR) spectrometer to obtain high-resolution MIR spectra (4000 cm

resultsThe logistic regression (LR) model achieved the highest accuracy, correctly predicting true vertebrate blood meal sources with overall accuracy of 98.4%. The model correctly identified 96% goat blood meals, 97% of bovine blood meals, 100% of chicken blood meals and 100% of human blood meals. Three percent of bovine blood meals were misclassified as goat, and 2% of goat blood meals misclassified as human.

conclusionMid-infrared spectroscopy coupled with supervised machine learning can accurately identify multiple vertebrate blood meals in malaria vectors, thus potentially enabling rapid assessment of mosquito blood-feeding histories and vectorial capacities. The technique is cost-effective, fast, simple, and requires no reagents other than desiccants. However, scaling it up will require field validation of the findings and boosting relevant technical capacity in affected countries.

Indexed as

Spectrophotometry, InfraredSupervised Machine LearningAnimalsAnophelesBloodChickensFeeding BehaviorFemaleGoatsHost SpecificityHumansLogistic ModelsMalariaMosquito VectorsVertebratesAnopheles arabiensisIfakaraMalariaMid-infrared spectroscopyMosquito blood mealsSupervised machine learningVector surveillance

Identifiers

PMID31146762
PMCPMC6543689

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.