Evidence map›Paper›PMID 31145784›Full record

ArticleJournal of experimental botany2019

Evolution and functional differentiation of recently diverged phytochelatin synthase genes from Arundo donax L.

Mingai Li, Luca Stragliati, Erika Bellini, Ada Ricci, Alessandro Saba, Luigi Sanità di Toppi, Claudio Varotto

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Phytochelatins: Sulfur-Containing Metal(loid)-Chelating Ligands in Plants.International journal of molecular sciences · 2023
    Review
  4. Heterologous Expression of the Phytochelatin SynthaseInternational journal of environmental research and public health · 2022
    Article
  5. Article
  6. Genetic Improvement ofPlants (Basel, Switzerland) · 2020
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Mingai LiDepartment of Biodiversity and Molecular Ecology, Research and Innovation Centre, Fondazione Edmund Mach, San Michele all'Adige (TN) , Italy.
Luca StragliatiDipartimento di Scienze Chimiche, della Vita e della Sostenibilità Ambientale, Università degli studi di Parma, Parco Area delle Scienze, Parma, Italy.
Erika BelliniDipartimento di Biologia, Università di Pisa, Pisa, Italy.
Ada RicciDipartimento di Scienze Chimiche, della Vita e della Sostenibilità Ambientale, Università degli studi di Parma, Parco Area delle Scienze, Parma, Italy.
Alessandro SabaDipartimento di Patologia Chirurgica, Medica, Molecolare e dell'Area Critica, Università di Pisa, Pisa, Italy.
Luigi Sanità di ToppiDipartimento di Biologia, Università di Pisa, Pisa, Italy.
Claudio VarottoDepartment of Biodiversity and Molecular Ecology, Research and Innovation Centre, Fondazione Edmund Mach, San Michele all'Adige (TN) , Italy.
University of Pisa · ITFondazione Edmund Mach · ITUniversity of Parma · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phytochelatin synthases (PCSs) play pivotal roles in the detoxification of heavy metals and metalloids in plants; however, little information on the evolution of recently duplicated PCS genes in plant species is available. Here we characterize the evolution and functional differentiation of three PCS genes from the giant reed (Arundo donax L.), a biomass/bioenergy crop with remarkable resistance to cadmium and other heavy metals. Phylogenetic reconstruction with PCS genes from fully sequenced monocotyledonous genomes indicated that the three A. donax PCSs, namely AdPCS1-3, form a monophyletic clade. The AdPCS1-3 genes were expressed at low levels in many A. donax organs and displayed different levels of cadmium-responsive expression in roots. Overexpression of AdPCS1-3 in Arabidopsis thaliana and yeast reproduced the phenotype of functional PCS genes. Mass spectrometry analyses confirmed that AdPCS1-3 are all functional enzymes, but with significant differences in the amount of the phytochelatins synthesized. Moreover, heterogeneous evolutionary rates characterized the AdPCS1-3 genes, indicative of relaxed natural selection. These results highlight the elevated functional differentiation of A. donax PCS genes from both a transcriptional and an enzymatic point of view, providing evidence of the high evolvability of PCS genes and of plant responsiveness to heavy metal stress.

Indexed as

Evolution, MolecularAmino Acid SequenceAminoacyltransferasesArabidopsisGene Expression Regulation, PlantMicroorganisms, Genetically-ModifiedPhylogenyPlant ProteinsPlants, Genetically ModifiedPoaceaeSaccharomyces cerevisiaeSequence AlignmentAminoacyltransferasesglutathione gamma-glutamylcysteinyltransferasePlant ProteinsCadmiumdivergencegene duplicationgiant reedphytochelatinsphytochelatin synthasesubfunctionalization

Identifiers

PMID31145784
PMCPMC6793451
OpenAlexW2947381435

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.