Evidence map›Paper›PMID 31144812›Full record

ArticleAnalytical chemistry2019

Simple and Efficient Room-Temperature Release of Biotinylated Nucleic Acids from Streptavidin and Its Application to Selective Molecular Detection.

Samuel Bearden, Fanny Wang, Adam R Hall

Abstract read
In one paragraph

Article in Analytical chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Detection of rare mutations, copy number alterations, and methylation in the same template DNA molecules.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Catch-enrich-release approach for amine-containing natural products.Chemical communications (Cambridge, England) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Samuel BeardenVirginia Tech-Wake Forest University School of Biomedical Engineering and Sciences , Wake Forest School of Medicine , Winston-Salem , North Carolina 27101 , United States.
Fanny WangVirginia Tech-Wake Forest University School of Biomedical Engineering and Sciences , Wake Forest School of Medicine , Winston-Salem , North Carolina 27101 , United States.
Adam R HallVirginia Tech-Wake Forest University School of Biomedical Engineering and Sciences , Wake Forest School of Medicine , Winston-Salem , North Carolina 27101 , United States.ORCID 0000-0003-2053-6075

Funding

Redox Biology and Medicine Training ProgramT32GM127261 · NIGMS · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI FURDUI, CRISTINA MARIA, POOLE, LESLIE B · 2018 to 2022
$975k
Molecular Detection of DNA Hydroxymethylation for Cancer ScreeningR21CA193067 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI HALL, ADAM ROGER · 2015 to 2017
$649k
NCI NIH HHS R21 CA193067NIGMS NIH HHS T32 GM127261
6 · The paper itself

Abstract

The biotin-streptavidin bond is the strongest noncovalent bond in nature and is thus used extensively in biotechnology applications. However, the difficulty of releasing the bond without high temperatures or corrosive solutions can be a barrier to applications involving nucleic acids and other delicate substrates. Here, room-temperature phenol is employed to release biotin-tagged DNA constructs from streptavidin rapidly and efficiently. It is demonstrated that synthetic biotinylated DNA can be recovered at yields approaching 100% from both solution-phase and bead-bound streptavidin with as little as 12% (v/v) phenol, leaving the biotin tag active and reusable after extraction. As an application of this recovery method, biotinylated DNA fragments are isolated from a mixed solution to provide selectivity for solid-state nanopore detection.

Indexed as

BiotinBiotinylationDNAElectrophoresis, Agar GelModels, MolecularNanoporesPhenolStreptavidinTemperatureBiotinDNAPhenolStreptavidin

Identifiers

PMID31144812
PMCPMC6854530

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.