Evidence map›Paper›PMID 31144001›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2019

Dissecting the genetic control of root and leaf tissue-specific anthocyanin pigmentation in carrot (Daucus carota L.).

Florencia Bannoud, Shelby Ellison, Marcos Paolinelli, Thomas Horejsi, Douglas Senalik, Martín Fanzone, Massimo Iorizzo, Philipp W Simon, Pablo F Cavagnaro

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 39 citations in OpenAlex.

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  16. Genome-based breeding approaches in major vegetable crops.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Florencia BannoudConsejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Av. Rivadavia 1917, C1033AAJ, Buenos Aires, Argentina.ORCID http://orcid.org/0000-0002-4813-9429
Shelby EllisonUSDA-Agricultural Research Service, Vegetable Crops Research Unit, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI, 53706-1590, USA.ORCID http://orcid.org/0000-0002-0790-4286
Marcos PaolinelliConsejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Av. Rivadavia 1917, C1033AAJ, Buenos Aires, Argentina.ORCID http://orcid.org/0000-0003-0098-0646
Thomas HorejsiUSDA-Agricultural Research Service, Vegetable Crops Research Unit, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI, 53706-1590, USA.
Douglas SenalikUSDA-Agricultural Research Service, Vegetable Crops Research Unit, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI, 53706-1590, USA.ORCID http://orcid.org/0000-0001-8526-0554
Martín FanzoneInstituto Nacional de Tecnología Agropecuaria INTA EEA Mendoza, San Martin 3853, Luján de Cuyo, 5507, Mendoza, Argentina.ORCID http://orcid.org/0000-0002-3356-1811
Massimo IorizzoPlants for Human Health Institute, North Carolina State University, Kannapolis, USA.
Philipp W SimonUSDA-Agricultural Research Service, Vegetable Crops Research Unit, University of Wisconsin-Madison, 1575 Linden Drive, Madison, WI, 53706-1590, USA. Philipp.Simon@ars.usda.gov.ORCID http://orcid.org/0000-0001-6978-6062
Pablo F CavagnaroConsejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Av. Rivadavia 1917, C1033AAJ, Buenos Aires, Argentina. cavagnaro.pablo@inta.gob.ar.ORCID http://orcid.org/0000-0001-5838-0876
Agricultural Research Service · USConsejo Nacional de Investigaciones Científicas y Técnicas · ARNational Agricultural Technology Institute · ARNorth Carolina State University · USUniversity of Wisconsin System · US

Funding

Agencia Nacional de Promoción Científica y Tecnológica Préstamo BID PICT-2015-1625Consejo Nacional de Investigaciones Científicas y Técnicas PhD fellowshipNational Institute of Food and Agriculture, U. S. Department of Agriculture (NIFA-USDA) (US) 2016-51181-25400United States Department of Agriculture National Institute of Food and Agriculture Hatch project 1008691
6 · The paper itself

Abstract

key messageInheritance, QTL mapping, phylogenetic, and transcriptome (RNA-Seq) analyses provide insight into the genetic control underlying carrot root and leaf tissue-specific anthocyanin pigmentation and identify candidate genes for root phloem pigmentation. Purple carrots can accumulate large quantities of anthocyanins in their root tissues, as well as in other plant parts. This work investigated the genetic control underlying tissue-specific anthocyanin pigmentation in the carrot root phloem and xylem, and in leaf petioles. Inheritance of anthocyanin pigmentation in these three tissues was first studied in segregating F

Indexed as

Quantitative Trait LociAnthocyaninsChromosomes, PlantColorDaucus carotaGene Expression ProfilingGene Expression Regulation, PlantPhylogenyPigmentationPlant LeavesPlant ProteinsPlant RootsPolymorphism, Single NucleotideTranscription FactorsTranscriptomeAnthocyaninsPlant ProteinsTranscription Factors

Identifiers

PMID31144001
OpenAlexW2947185852

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.