Evidence map›Paper›PMID 31143201›Full record

ArticleFrontiers in genetics2019

Quality Control of Quantitative High Throughput Screening Data.

Keith R Shockley, Shuva Gupta, Shawn F Harris, Soumendra N Lahiri, Shyamal D Peddada

Abstract read
In one paragraph

Article in Frontiers in genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. A Hybrid Experimental and in silico Platform for ITPK1 Chemical Probe Discovery.SLAS discovery : advancing life sciences R & D · 2026
    Article
  2. Article
  3. Cluster Based Association Measures with Applications.Sankhya. Series B. [Methodological.] · 2025
    Article
  4. Article
  5. Article
  6. Artificial intelligence as a tool in drug discovery and development.World journal of experimental medicine · 2024
    Review
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Keith R ShockleyBiostatistics and Computational Biology Branch, National Institute of Environmental Health Sciences, National Institutes of Health, Durham, NC, United States.
Shuva GuptaStatistics Department, University of Pennsylvania, Philadelphia, PA, United States.
Shawn F HarrisSocial and Scientific Systems, Durham, NC, United States.
Soumendra N LahiriDepartment of Statistics, North Carolina State University, Raleigh, NC, United States.
Shyamal D PeddadaDepartment of Biostatistics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA, United States.

Funding

Analysis of Quantitative High Throughput Screening DataZIAES102865 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI SHOCKLEY, KEITH · 2010 to 2025
$2.8M
Intramural NIH HHS ZIA ES102865NIEHS NIH HHS HHSN273201600011C
6 · The paper itself

Abstract

Quantitative high throughput screening (qHTS) experiments can generate 1000s of concentration-response profiles to screen compounds for potentially adverse effects. However, potency estimates for a single compound can vary considerably in study designs incorporating multiple concentration-response profiles for each compound. We introduce an automated quality control procedure based on analysis of variance (ANOVA) to identify and filter out compounds with multiple cluster response patterns and improve potency estimation in qHTS assays. Our approach, called

Indexed as

ANOVAclusteringconcentration-responsepotencyquantitative high throughput screeningtoxicological response

Identifiers

PMID31143201
PMCPMC6520559

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.