Evidence map›Paper›PMID 31142673›Full record

ArticleJournal of virology2019

Temporal Proteomic Analysis of BK Polyomavirus Infection Reveals Virus-Induced G

Laura G Caller, Colin T R Davies, Robin Antrobus, Paul J Lehner, Michael P Weekes, Colin M Crump

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.9field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. The Pathology of Viral Infections.Advances in experimental medicine and biology · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Acute Kidney Injury and BK Polyomavirus in Urine Sediment Cells.International journal of molecular sciences · 2023
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Laura G Caller *Division of Virology, Department of Pathology, University of Cambridge, Cambridge, United Kingdom.
Colin T R Davies *Cambridge Institute for Medical Research, Addenbrooke's Hospital, Cambridge, United Kingdom.
Robin AntrobusCambridge Institute for Medical Research, Addenbrooke's Hospital, Cambridge, United Kingdom.
Paul J LehnerCambridge Institute for Medical Research, Addenbrooke's Hospital, Cambridge, United Kingdom.ORCID 0000-0001-9383-1054
Michael P WeekesCambridge Institute for Medical Research, Addenbrooke's Hospital, Cambridge, United Kingdom mpw1001@cam.ac.uk cmc56@cam.ac.uk.ORCID 0000-0003-3196-5545
Colin M CrumpDivision of Virology, Department of Pathology, University of Cambridge, Cambridge, United Kingdom mpw1001@cam.ac.uk cmc56@cam.ac.uk.ORCID 0000-0001-9918-9998
Addenbrooke's Hospital · GBUniversity of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council BB/M021424/1Medical Research CouncilWellcome Trust 108070/Z/15/ZWellcome Trust 210688/Z/18/Z
6 · The paper itself

Abstract

BK polyomavirus (BKPyV) is a small DNA virus that establishes a life-long persistent infection in the urinary tract of most people. BKPyV is known to cause severe morbidity in renal transplant recipients and can lead to graft rejection. The simple 5.2-kbp double-stranded DNA (dsDNA) genome expresses just seven known proteins; thus, it relies heavily on the host machinery to replicate. How the host proteome changes over the course of infection is key to understanding this host-virus interplay. Here, for the first time quantitative temporal viromics has been used to quantify global changes in >9,000 host proteins in two types of primary human epithelial cells throughout 72 h of BKPyV infection. These data demonstrate the importance of cell cycle progression and pseudo-G

Indexed as

G2 Phase Cell Cycle CheckpointsImmunity, InnateProteomeProteomicsBiomarkersBK VirusCell Cycle ProteinsDisease ResistanceDisease SusceptibilityHost-Pathogen InteractionsHumansPolyomavirus InfectionsWorkflowBiomarkersCell Cycle ProteinsProteomecell cycleimmune evasioninnate immunitypolyomavirusproteomics

Identifiers

PMID31142673
PMCPMC6675895
OpenAlexW2952077983

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.