Evidence map›Paper›PMID 31141272›Full record

ArticlePlant biotechnology journal2020

Using Heading date 1 preponderant alleles from indica cultivars to breed high-yield, high-quality japonica rice varieties for cultivation in south China.

Yujia Leng, Yihong Gao, Long Chen, Yaolong Yang, Lichao Huang, Liping Dai, Deyong Ren, Qiankun Xu, Ya Zhang, Kimberly Ponce and 11 more

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. The Molecular Breeding of Different EcotypePlants (Basel, Switzerland) · 2025
    Article
  3. OsCOL5 suppresses heading through modulation of Ghd7 and Ehd2, enhancing rice yield.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Double Mutation ofInternational journal of molecular sciences · 2023
    Article
  8. Nutrient-mediated modulation of flowering time.Frontiers in plant science · 2023
    Review
  9. Transcription factor bZIP65 delays flowering via suppressingMolecular breeding : new strategies in plant improvement · 2022
    Article
  10. Article
  11. Article
  12. Plants (Basel, Switzerland) · 2021
    Article
  13. Review
  14. Natural Variation inFrontiers in plant science · 2021
    Article
  15. Review
  16. How does nitrogen shape plant architecture?Journal of experimental botany · 2020
    Review
  17. In-Frame and Frame-Shift Editing of theFrontiers in plant science · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Yujia LengState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.ORCID 0000-0002-4686-2111
Yihong GaoState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Long ChenState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Yaolong YangState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Lichao HuangState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Liping DaiState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Deyong RenState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.ORCID 0000-0003-1140-3633
Qiankun XuState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Ya ZhangState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Kimberly PonceState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Jiang HuState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Lan ShenState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Guangheng ZhangState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Guang ChenState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Guojun DongState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Zhenyu GaoState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Longbiao GuoState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Guoyou YeCAAS-IRRI Joint Laboratory for Genomics-assisted Germplasm Enhancement, Agricultural Genomics Institute in Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China.
Qian QianState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Li ZhuState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.
Dali ZengState Key Laboratory for Rice Biology, China National Rice Research Institute, Hangzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heading date 1 (Hd1) is an important gene for the regulation of flowering in rice, but its variation in major cultivated rice varieties, and the effect of this variation on yield and quality, remains unknown. In this study, we selected 123 major rice varieties cultivated in China from 1936 to 2009 to analyse the relationship between the Hd1 alleles and yield-related traits. Among these varieties, 19 haplotypes were detected in Hd1, including two major haplotypes (H8 and H13) in the japonica group and three major haplotypes (H14, H15 and H16) in the indica group. Analysis of allele frequencies showed that the secondary branch number was the major aimed for Chinese indica breeding. In the five major haplotypes, SNP

Indexed as

Plant BreedingAllelesChinaGene FrequencyHaplotypesOryzaPolymorphism, Single Nucleotideassociation analysisHd1 preponderant alleleheading datemajor Chinese cultivated rice varietiesyield- and quality-related traits improvement

Identifiers

PMID31141272
PMCPMC6920332

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.