Evidence map›Paper›PMID 31139675›Full record

ArticleOpen forum infectious diseases2019

Genome Sequencing Verifies Relapsed Infection of

Osamu Sawada, Yasuhiro Gotoh, Takako Taniguchi, Shota Furukawa, Dai Yoshimura, Satomi Sasaki, Haruki Shida, Yoshihiro Kusunoki, Tsuyoshi Yamamura, Ken Furuya and 4 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Open forum infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Osamu SawadaCenter of Nephrology and Connective Tissue Disease, Japan Community Health Care Organization Hokkaido Hospital, Japan.
Yasuhiro GotohDepartment of Bacteriology, Faculty of Medical Sciences, Kyushu University, Japan.
Takako TaniguchiCenter for Animal Disease Control, University of Miyazaki, Japan.
Shota FurukawaCenter of Nephrology and Connective Tissue Disease, Japan Community Health Care Organization Hokkaido Hospital, Japan.
Dai YoshimuraGraduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, Japan.
Satomi SasakiCenter for Animal Disease Control, University of Miyazaki, Japan.
Haruki ShidaCenter of Nephrology and Connective Tissue Disease, Japan Community Health Care Organization Hokkaido Hospital, Japan.
Yoshihiro KusunokiCenter of Nephrology and Connective Tissue Disease, Japan Community Health Care Organization Hokkaido Hospital, Japan.
Tsuyoshi YamamuraCenter of Nephrology and Connective Tissue Disease, Japan Community Health Care Organization Hokkaido Hospital, Japan.
Ken FuruyaCenter of Nephrology and Connective Tissue Disease, Japan Community Health Care Organization Hokkaido Hospital, Japan.
Takehiko ItohGraduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, Japan.
Tetsuya HoritaCenter of Nephrology and Connective Tissue Disease, Japan Community Health Care Organization Hokkaido Hospital, Japan.
Tetsuya HayashiDepartment of Bacteriology, Faculty of Medical Sciences, Kyushu University, Japan.
Naoaki MisawaCenter for Animal Disease Control, University of Miyazaki, Japan.
Hokkaido hospital · JPUniversity of Miyazaki · JPKyushu University · JPTokyo Institute of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRecurrent infections of

methodsA 69-year-old woman presented with recurrent

resultsWhole-genome sequence analysis revealed only 6 SNP sites among the 20 isolates at the whole-genome level. Based on the 6 SNPs, 5 within-host variants (referred to as genotypes) were identified. All 5 genotypes were detected in the first infection; however, only 2 genotypes were detected in the second infection. Although the

conclusionsThe second infection analyzed here was a relapse of the first infection. A certain level of within-host genomic heterogeneity of the

Indexed as

Helicobacter cinaedirecurrent infectionrelapsewhole-genome sequencingwithin-host diversity

Identifiers

PMID31139675
PMCPMC6527084
OpenAlexW2942133350

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.