Evidence map›Paper›PMID 31138754›Full record

ArticlemBio2019

Bacteria Floc, but Do They Flock? Insights from Population Interaction Models of Quorum Sensing.

Hana Ueda, Kristina Stephens, Konstantina Trivisa, William E Bentley

Open access · goldAbstract read
In one paragraph

Article in mBio, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hana UedaDepartment of Mathematics, University of Maryland College Park, College Park, Maryland, USA.
Kristina StephensFischell Department of Bioengineering, University of Maryland College Park, College Park, Maryland, USA.
Konstantina TrivisaDepartment of Mathematics, University of Maryland College Park, College Park, Maryland, USA.
William E BentleyGraduate Program in Applied Mathematics & Statistics, and Scientific Computation, University of Maryland College Park, College Park, Maryland, USA bentley@umd.edu.
University of Maryland, College Park · US

Funding

Training in Host-pathogens interactionsT32AI089621 · NIAID · UNIV OF MARYLAND, COLLEGE PARK · PI LEE, VINCENT T, MCIVER, KEVIN S. · 2010 to 2025
$2.1M
Accessing molecular communication via synthetic biology and microelectronics – gut on a chip modelR21EB024102 · NIBIB · UNIV OF MARYLAND, COLLEGE PARK · PI BENTLEY, WILLIAM E. · 2017 to 2018
$412k
NIAID NIH HHS T32 AI089621NIBIB NIH HHS R21 EB024102
6 · The paper itself

Abstract

Quorum sensing (QS) enables coordinated, population-wide behavior. QS-active bacteria "communicate" their number density using autoinducers which they synthesize, collect, and interpret. Tangentially, chemotactic bacteria migrate, seeking out nutrients and other molecules. It has long been hypothesized that bacterial behaviors, such as chemotaxis, were the primordial progenitors of complex behaviors of higher-order organisms. Recently, QS was linked to chemotaxis, yet the notion that these behaviors can together contribute to higher-order behaviors has not been shown. Here, we mathematically link flocking behavior, commonly observed in fish and birds, to bacterial chemotaxis and QS by constructing a phenomenological model of population-scale QS-mediated phenomena. Specifically, we recast a previously developed mathematical model of flocking and found that simulated bacterial behaviors aligned well with well-known QS behaviors. This relatively simple system of ordinary differential equations affords analytical analysis of asymptotic behavior and describes cell position and velocity, QS-mediated protein expression, and the surrounding concentrations of an autoinducer. Further, heuristic explorations of the model revealed that the emergence of "migratory" subpopulations occurs only when chemotaxis is directly linked to QS. That is, behaviors were simulated when chemotaxis was coupled to QS and when not. When coupled, the bacterial flocking model predicts the formation of two distinct groups of cells migrating at different speeds in their journey toward an attractant. This is qualitatively similar to phenomena spotted in our

Indexed as

Bacterial Physiological PhenomenaChemotaxisModels, TheoreticalQuorum SensingEscherichia coliModels, Biologicalchemotaxisflockingquorum sensing

Identifiers

PMID31138754
PMCPMC6538791
OpenAlexW2946401697

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.