Evidence map›Paper›PMID 31138701›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Human NK cell receptor KIR2DS4 detects a conserved bacterial epitope presented by HLA-C.

Malcolm J W Sim, Sumati Rajagopalan, Daniel M Altmann, Rosemary J Boyton, Peter D Sun, Eric O Long

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 80 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Malcolm J W SimMolecular and Cellular Immunology Section, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Rockville, MD 20852.ORCID 0000-0003-3407-9661
Sumati RajagopalanMolecular and Cellular Immunology Section, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Rockville, MD 20852.
Daniel M AltmannLung Immunology Group, Department of Medicine, Imperial College London, London W12 0NN, United Kingdom.
Rosemary J BoytonLung Immunology Group, Department of Medicine, Imperial College London, London W12 0NN, United Kingdom.
Peter D SunStructural Immunology Section, Laboratory of Immunogenetics, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Rockville, MD 20852.
Eric O LongMolecular and Cellular Immunology Section, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Rockville, MD 20852; elong@nih.gov.ORCID 0000-0002-7793-3728
National Institutes of Health · USImperial College London · GB

Funding

Structural Characterization Of ProteinsZIAAI000697 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI SUN, PETER D. · 2009 to 2025
$12.3M
Regulation of innate lymphocyte functionZIAAI000525 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI LONG, ERIC O · 2009 to 2024
$12.0M
MOLECULAR ANALYSIS OF HUMAN NATURAL KILLER CELLSZ01AI000525 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI LONG, ERIC O · 1988 to 2008
$4.7M
STRUCTURAL CHARACTERIZATION OF PROTEINSZ01AI000697 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI SUN, PETER D. · 1994 to 2008
$2.0M
Intramural NIH HHS Z01 AI000525Intramural NIH HHS Z01 AI000697NIAID NIH HHS HHSN272200900046CWellcome TrustWellcome Trust WT095472MA
6 · The paper itself

Abstract

Natural killer (NK) cells have an important role in immune defense against viruses and cancer. Activation of human NK cell cytotoxicity toward infected or tumor cells is regulated by killer cell immunoglobulin-like receptors (KIRs) that bind to human leukocyte antigen class I (HLA-I). Combinations of KIR with HLA-I are genetically associated with susceptibility to disease. KIR2DS4, an activating member of the KIR family with poorly defined ligands, is a receptor of unknown function. Here, we show that KIR2DS4 has a strong preference for rare peptides carrying a Trp at position 8 (p8) of 9-mer peptides bound to HLA-C*05:01. The complex of a peptide bound to HLA-C*05:01 with a Trp at p8 was sufficient for activation of primary KIR2DS4

Indexed as

Amino Acid MotifsBacteriaCell LineEpitopesHLA-C AntigensHumansKiller Cells, NaturalRec A RecombinasesReceptors, KIREpitopesHLA-C*05 antigenHLA-C AntigensKIR2DS4 protein, humanRec A RecombinasesReceptors, KIRbacteriaHLA-CKIRNK cellsRecA

Identifiers

PMID31138701
PMCPMC6601252
OpenAlexW2946911529

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.