ArticleBMC plant biology2019
Genome-wide identification and classification of MIKC-type MADS-box genes in Streptophyte lineages and expression analyses to reveal their role in seed germination of orchid.
Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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13 citing papers in PubMed, 29 citations in OpenAlex.
- Genome-wide identification of MADS-box genes and functional analysis of EgMADS3 in oil palm flower development.BMC plant biology · 2026Article
- The origin, evolution, and diversification of MADS-box transcription factors in green plants.Plant communications · 2025Article
- Transcriptome analysis reveals that regulation network of the genes related to unique double flowers in tropical viviparous water lily.Scientific reports · 2025Article
- Genome-wide characterization and expression profiling of MADS-box family genes during organ development and drought stress in Camelina sativa L.Scientific reports · 2025Article
- Insights into genetics of floral development in Amborella trichopoda Baill. through genome-wide survey and expression analysis of MADS-Box transcription factors.Scientific reports · 2025Article
- Genome-wide molecular evolution analysis of the GRF and GIF gene families in Plantae (Archaeplastida).BMC genomics · 2024Article
- Genomic and Transcriptomic Insights into the Evolution and Divergence of MIKC-Type MADS-Box Genes inInternational journal of molecular sciences · 2023Article
- Genome-wide analysis of MADS-box gene family in kiwifruit (Frontiers in genetics · 2022Article
- The genome of Cymbidium sinense revealed the evolution of orchid traits.Plant biotechnology journal · 2021Article
- Genome-Wide Identification and Analysis of the APETALA2 (AP2) Transcription Factor inInternational journal of molecular sciences · 2021Article
- Genome-Wide Analysis ofFrontiers in plant science · 2021Article
- Transcriptome sequencing and metabolite profiling analyses provide comprehensive insight into molecular mechanisms of flower development in Dendrobium officinale (Orchidaceae).Plant molecular biology · 2020Article
- Identification and expression profiling of selected MADS-box family genes in Dendrobium officinale.Genetica · 2019Article
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Authors and funding
5 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundMADS-box genes play crucial roles in plant floral organ formation and plant reproductive development. However, there is still no information on genome-wide identification and classification of MADS-box genes in some representative plant species. A comprehensive investigation of MIKC-type genes in the orchid Dendrobium officinale is still lacking.
resultsHere we conducted a genome-wide analysis of MADS-box proteins from 29 species. In total, 1689 MADS-box proteins were identified. Two types of MADS-box genes, termed type I and II, were found in land plants, but not in liverwort. The SQUA, DEF/GLO, AG and SEP subfamilies existed in all the tested flowering plants, while SQUA was absent in the gymnosperm Ginkgo biloba, and no genes of the four subfamilies were found in a charophyte, liverwort, mosses, or lycophyte. This strongly corroborates the notion that clades of floral organ identity genes led to the evolution of flower development in flowering plants. Nine subfamilies of MIKC
conclusionsMIKC-type genes were identified from streptophyte lineages, revealing new insights into their evolution and development relationships. Our results show a novel role of MIKC-type genes in seed germination and provide a useful clue for future research on seed germination in orchids.
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