Evidence map›Paper›PMID 31137708›Full record

ArticleToxins2019

Bacterial Lipopolysaccharide Induced Alterations of Genome-Wide DNA Methylation and Promoter Methylation of Lactation-Related Genes in Bovine Mammary Epithelial Cells.

Jingbo Chen, Yongjiang Wu, Yawang Sun, Xianwen Dong, Zili Wang, Zhu Zhang, Yanli Xiao, Guozhong Dong

Open access · goldAbstract read
In one paragraph

Article in Toxins, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
8.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 52 citations in OpenAlex.

  1. Review
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  10. Less Severe Polymicrobial Sepsis in ConditionalInternational journal of molecular sciences · 2023
    Article
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  12. Article
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  20. PGN and LTA fromToxins · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jingbo ChenCollege of Animal Science and Technology, Southwest University, Beibei 400716, China. c10417511@email.swu.edu.cn.
Yongjiang WuCollege of Animal Science and Technology, Southwest University, Beibei 400716, China. wuyongjiang@email.swu.edu.cn.
Yawang SunCollege of Animal Science and Technology, Southwest University, Beibei 400716, China. syaw507@swu.edu.cn.
Xianwen DongInstitute for Herbivorous Livestock Research, Chongqing Academy of Animal Science, Chongqing 402460, China. chenghuafen@email.swu.edu.cn.
Zili WangCollege of Animal Science and Technology, Southwest University, Beibei 400716, China. wzl9698@swu.edu.cn.
Zhu ZhangCollege of Animal Science and Technology, Southwest University, Beibei 400716, China. b20020901102@swu.edu.cn.
Yanli XiaoCollege of International Studies, Southwest University, Beibei 400716, China. xyl616856826@email.swu.edu.cn.
Guozhong DongCollege of Animal Science and Technology, Southwest University, Beibei 400716, China. gzdong@swu.edu.cn.ORCID 0000-0001-7355-3050
Southwest University · CNChongqing Academy of Animal Science · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial lipopolysaccharide (LPS) could result in poor lactation performance in dairy cows. High methylation of DNA is associated with gene repression. However, it is unclear whether LPS could suppress the expression of lactation-related genes by inducing DNA methylation. Therefore, the objective of this study was to investigate the impact of LPS on genome-wide DNA methylation, using methylated DNA immunoprecipitation with high-throughput sequencing (MeDIP-seq) and on the promoter methylation of lactation-related genes using MassArray analysis in bovine mammary epithelial cells. The bovine mammary epithelial cell line MAC-T cells were treated for 48 h with LPS at different doses of 0, 1, 10, 100, and 1000 endotoxin units (EU)/mL (1 EU = 0.1 ng). The results showed that the genomic methylation levels and the number of methylated genes in the genome as well as the promoter methylation levels of milk genes increased when the LPS dose was raised from 0 to 10 EU/mL, but decreased after further increasing the LPS dose. The milk gene mRNA expression levels of the 10 EU/mL LPS treatment were significantly lower than these of untreated cells. The results also showed that the number of hypermethylated genes was greater than that of hypomethylated genes in lipid and amino acid metabolic pathways following 1 and 10 EU/mL LPS treatments as compared with control. By contrast, in the immune response pathway the number of hypomethylated genes increased with increasing LPS doses. The results indicate LPS at lower doses induced hypermethylation of the genome and promoters of lactation-related genes, affecting milk gene mRNA expression. However, LPS at higher doses induced hypomethylation of genes involved in the immune response pathway probably in favor of immune responses.

Indexed as

AnimalsCattleCell LineDNA MethylationEpithelial CellsFemaleGene Expression RegulationGenomeLactationLipopolysaccharidesMammary Glands, AnimalPromoter Regions, GeneticLipopolysaccharidesbovineDNA methylationendotoxinepithelial cellslipopolysaccharidemammary

Identifiers

PMID31137708
PMCPMC6563294
OpenAlexW2945986110

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.