Evidence map›Paper›PMID 31135339›Full record

ArticleeLife2019

Transcriptome maps of general eukaryotic RNA degradation factors.

Salma Sohrabi-Jahromi, Katharina B Hofmann, Andrea Boltendahl, Christian Roth, Saskia Gressel, Carlo Baejen, Johannes Soeding, Patrick Cramer

Open access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. ALYREF condensation stabilizes mThe EMBO journal · 2026
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  5. Review
  6. Article
  7. RNA Pol II Assembly Affects ncRNA Expression.International journal of molecular sciences · 2023
    Article
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  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Salma Sohrabi-Jahromi *Quantitative and Computational Biology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.ORCID 0000-0002-8417-8230
Katharina B Hofmann *Department of Molecular Biology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.ORCID 0000-0002-0683-6277
Andrea BoltendahlDepartment of Molecular Biology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.
Christian RothQuantitative and Computational Biology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.
Saskia GresselDepartment of Molecular Biology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.ORCID 0000-0003-0261-675X
Carlo BaejenDepartment of Molecular Biology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.
Johannes SoedingQuantitative and Computational Biology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.
Patrick CramerDepartment of Molecular Biology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany.ORCID 0000-0001-5454-7755
Max Planck Institute for Biophysical Chemistry · DE

Funding

Deutsche Forschungsgemeinschaft SPP1935 grant CR 117/6-1European Research Council Advanced Grant TransregulonMax-Planck-Gesellschaft Open-Access funding
6 · The paper itself

Abstract

RNA degradation pathways enable RNA processing, the regulation of RNA levels, and the surveillance of aberrant or poorly functional RNAs in cells. Here we provide transcriptome-wide RNA-binding profiles of 30 general RNA degradation factors in the yeast

Indexed as

Cell NucleusExosomesMultiprotein ComplexesProtein BiosynthesisRNA CapsRNA, MessengerRNA Processing, Post-TranscriptionalRNA StabilitySaccharomyces cerevisiaeTranscriptomeMultiprotein ComplexesRNA CapsRNA, Messengerchromosomescomputational biologygene expressionPAR-CLIPRNA degradationSaccharomyces cerevisiaeS. cerevisiaesystems biologytranscriptome maps

Identifiers

PMID31135339
PMCPMC6570525
OpenAlexW2946931111

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.