Evidence map›Paper›PMID 31135185›Full record

ArticleEnvironmental health perspectives2019

Association of Arsenic Exposure with Whole Blood DNA Methylation: An Epigenome-Wide Study of Bangladeshi Adults.

Kathryn Demanelis, Maria Argos, Lin Tong, Justin Shinkle, Mekala Sabarinathan, Muhammad Rakibuz-Zaman, Golam Sarwar, Hasan Shahriar, Tariqul Islam, Mahfuzar Rahman and 7 more

Open access · diamondAbstract read
In one paragraph

Article in Environmental health perspectives, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it, 62 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Update of the risk assessment of inorganic arsenic in food.EFSA journal. European Food Safety Authority · 2024
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 3 countries.

Kathryn DemanelisDepartment of Public Health Sciences, University of Chicago, Chicago, Illinois, USA.
Maria ArgosDivision of Epidemiology and Biostatistics, School of Public Health, University of Illinois at Chicago, Chicago, Illinois, USA.
Lin TongDepartment of Public Health Sciences, University of Chicago, Chicago, Illinois, USA.
Justin ShinkleDepartment of Public Health Sciences, University of Chicago, Chicago, Illinois, USA.
Mekala SabarinathanDepartment of Public Health Sciences, University of Chicago, Chicago, Illinois, USA.
Muhammad Rakibuz-ZamanUChicago Research Bangladesh, Mohakhali, Dhaka, Bangladesh.
Golam SarwarUChicago Research Bangladesh, Mohakhali, Dhaka, Bangladesh.
Hasan ShahriarUChicago Research Bangladesh, Mohakhali, Dhaka, Bangladesh.
Tariqul IslamUChicago Research Bangladesh, Mohakhali, Dhaka, Bangladesh.
Mahfuzar RahmanUChicago Research Bangladesh, Mohakhali, Dhaka, Bangladesh.
Mohammad YunusInternational Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.
Joseph H GrazianoDepartment of Environmental Health Sciences, Mailman School of Public Health, Columbia University, New York, New York, USA.
Karin BrobergUnit of Metals and Health, Institute of Environmental Medicine, Karolinska Institute, Stockholm, Sweden.
Karin EngströmDivision of Occupational and Environmental Medicine, Department of Laboratory Medicine, Lund University, Lund, Sweden.
Farzana JasmineDepartment of Public Health Sciences, University of Chicago, Chicago, Illinois, USA.
Habibul AhsanDepartment of Public Health Sciences, University of Chicago, Chicago, Illinois, USA.
Brandon L PierceDepartment of Public Health Sciences, University of Chicago, Chicago, Illinois, USA.
Chicago Department of Public Health · USUniversity of Chicago Research Bangladesh · BDBRAC · BDColumbia University · USInternational Centre for Diarrhoeal Disease Research · BDKarolinska Institutet · SELund University · SEUniversity of Illinois Chicago · US

Funding

VIRAL ONCOLOGY CORE FACILITYP30CA014599 · NCI · UNIVERSITY OF CHICAGO · PI CHIEN-MIN KAO · 1985 to 2026
$122.1M
Training CoreP42ES010349 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI NAVAS-ACIEN, ANA · 2000 to 2020
$53.6M
True Metal fac coreP30ES009089 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MATTHEW S PERZANOWSKI · 1998 to 2026
$44.7M
Chemoprevention of arsenic-induced skin cancerR01CA107431 · NCI · UNIVERSITY OF CHICAGO · PI AHSAN, HABIBUL · 2005 to 2014
$17.3M
Pilot Program CoreP30ES027792 · NIEHS · UNIVERSITY OF CHICAGO · PI Gokhan M. Mutlu, Gail S Prins · 2017 to 2026
$13.6M
SPECIALIZED TRAINING PROGRAM IN THE DEMOGRAPHY &ECON.T32AG000243 · NIA · UNIVERSITY OF CHICAGO · PI DAVID O MELTZER · 1994 to 2026
$8.2M
Arsenic and the Human Genome: susceptibility and response to exposure Supplement 4R35ES028379 · NIEHS · UNIVERSITY OF CHICAGO · PI PIERCE, BRANDON LEE · 2017 to 2024
$5.6M
Genetic Susceptibility to Arsenic-induced Skin CancerR01CA102484 · NCI · UNIVERSITY OF CHICAGO · PI AHSAN, HABIBUL · 2004 to 2008
$2.0M
A Study of Telomeres in an Arsenic-Exposed Bangladesh CohortR01ES020506 · NIEHS · UNIVERSITY OF CHICAGO · PI PIERCE, BRANDON LEE · 2011 to 2015
$1.9M
Enhancement and Maintenance of the HEALS cohortR24ES028532 · NIEHS · UNIVERSITY OF CHICAGO · PI AHSAN, HABIBUL · 2017 to 2022
$1.7M
NCI NIH HHS P30 CA014599NCI NIH HHS R01 CA102484NCI NIH HHS R01 CA107431NIA NIH HHS T32 AG000243NIEHS NIH HHS P30 ES009089NIEHS NIH HHS P30 ES027792NIEHS NIH HHS P42 ES010349NIEHS NIH HHS R01 ES020506NIEHS NIH HHS R35 ES028379
6 · The paper itself

Abstract

backgroundArsenic exposure affects [Formula: see text] people worldwide, including [Formula: see text] in Bangladesh. Arsenic exposure increases the risk of cancer and other chronic diseases, and one potential mechanism of arsenic toxicity is epigenetic dysregulation.

objectiveWe assessed associations between arsenic exposure and genome-wide DNA methylation measured at baseline among 396 Bangladeshi adults participating in the Health Effects of Arsenic Longitudinal Study (HEALS) who were exposed by drinking naturally contaminated well water.

methodsMethylation in whole blood DNA was measured at [Formula: see text] using the Illumina InfiniumMethylationEPIC (EPIC) array. To assess associations between arsenic exposure and CpG methylation, we used linear regression models adjusted for covariates and surrogate variables (SVs) (capturing unknown technical and biologic factors). We attempted replication and conducted a meta-analysis using an independent dataset of [Formula: see text] from 400 Bangladeshi individuals with arsenical skin lesions.

resultsWe identified 34 CpGs associated with [Formula: see text] creatinine-adjusted urinary arsenic [[Formula: see text]]. Sixteen of these CpGs annotated to the [Formula: see text] array, and 10 associations were replicated ([Formula: see text]). The top two CpGs annotated upstream of the ABR gene (cg01912040, cg10003262 ). All urinary arsenic-associated CpGs were also associated with arsenic concentration measured in drinking water ([Formula: see text]). Meta-analysis ([Formula: see text] samples) identified 221 urinary arsenic-associated CpGs ([Formula: see text]). The arsenic-associated CpGs from the meta-analysis were enriched in non-CpG islands and shores ([Formula: see text]) and depleted in promoter regions ([Formula: see text]). Among the arsenic-associated CpGs ([Formula: see text]), we observed significant enrichment of genes annotating to the reactive oxygen species pathway, inflammatory response, and tumor necrosis factor [Formula: see text] ([Formula: see text]) signaling via nuclear factor kappa-B ([Formula: see text]) hallmarks ([Formula: see text]).

conclusionsThe novel and replicable associations between arsenic exposure and DNA methylation at specific CpGs observed in this work suggest that epigenetic alterations should be further investigated as potential mediators in arsenic toxicity and as biomarkers of exposure and effect in exposed populations. https://doi.org/10.1289/EHP3849.

Indexed as

AdultAgedArsenicBangladeshCohort StudiesCpG IslandsDNA MethylationDrinking WaterEnvironmental ExposureFemaleHumansMaleMiddle AgedWater Pollutants, ChemicalYoung AdultArsenicDrinking WaterWater Pollutants, Chemical

Identifiers

PMID31135185
PMCPMC6791539
OpenAlexW2947078150

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.