Evidence map›Paper›PMID 31134487›Full record

ArticleNeuromolecular medicine2019

Role of Apolipoprotein E, Cathepsin D, and Brain-Derived Neurotrophic Factor in Parkinson's Disease: A Study from Eastern India.

Prosenjit Pal, Tamal Sadhukhan, Subhadip Chakraborty, Sriparna Sadhukhan, Arindam Biswas, Shyamal K Das, Kunal Ray, Jharna Ray

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Article in Neuromolecular medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Prosenjit PalS. N. Pradhan Centre for Neurosciences, University of Calcutta, Kolkata, West Bengal, India.
Tamal SadhukhanS. N. Pradhan Centre for Neurosciences, University of Calcutta, Kolkata, West Bengal, India.
Subhadip ChakrabortyS. N. Pradhan Centre for Neurosciences, University of Calcutta, Kolkata, West Bengal, India.
Sriparna SadhukhanS. N. Pradhan Centre for Neurosciences, University of Calcutta, Kolkata, West Bengal, India.
Arindam BiswasS. N. Pradhan Centre for Neurosciences, University of Calcutta, Kolkata, West Bengal, India.
Shyamal K DasBangur Institute of Neurosciences, Kolkata, West Bengal, India.
Kunal RayATGC Diagnostics Private Limited, Kolkata, West Bengal, India.
Jharna RayS. N. Pradhan Centre for Neurosciences, University of Calcutta, Kolkata, West Bengal, India. jharnaray@gmail.com.
University of Calcutta · INBangur Institute of Neurosciences · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Parkinson's disease (PD) is a progressive neurodegenerative disease with complex etiology. Both genetic and environmental factors play significant role. Apart from candidate genes, some modifier genes have been reported to be associated with the altered risk of PD. Previous studies have identified Apolipoprotein E (APOE), Cathepsin D (CTSD), and Brain-Derived Neurotrophic Factor (BDNF) as key players of neurodegenerative pathways with their variants associated with different neurodegenerative diseases. Hence, this study aims to identify the potential role of these modifier genes in the pathogenesis of PD among Eastern Indian PD patients. A case-control study was performed using 302 clinically diagnosed PD patients and 304 ethnically matched controls. Promoter SNPs of APOE (rs449647, rs405509) and BDNF (rs56164415), and coding SNPs of APOE (rs429358, rs7412 resulting in ε2, ε3, and ε4 alleles), CTSD (rs17571), and BDNF (rs6265) were analyzed by PCR-RFLP and bidirectional sequencing. The effect of rs56164415 on BDNF expression was characterized by Luciferase assay. APOEε4 allele was significantly overrepresented (p value = 0.0003) among PD patients, whereas ε3 allele was predominant in the control population. The promoter haplotype (A-rs449647, G-rs405509) of APOE was preponderant among female PD patients posing risk. No association was found for CTSD polymorphism. The 'T/T' genotype of BDNF rs56164415 was overrepresented (p-value = 0.02) among early onset PD patients. Expression of BDNF for the 'T/T' variant was significantly lower (p-value = 0.012) than the 'C/C' variant, suggesting a possible role in PD pathogenesis. This study suggests that APOE and BDNF may serve as modifier loci among eastern Indian PD patients.

Indexed as

AdolescentAdultAgedAge of OnsetAllelesApolipoproteins EBrain-Derived Neurotrophic FactorCase-Control StudiesCathepsin DChildFemaleGene FrequencyGenotypeHumansIndiaMaleApolipoproteins EBDNF protein, humanBrain-Derived Neurotrophic FactorCathepsin DCTSD protein, humanProtein IsoformsAPOEBDNFCTSDLuciferase assayParkinson’s disease

Identifiers

PMID31134487
OpenAlexW2947316547

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.