Evidence map›Paper›PMID 31134483›Full record

ArticleFunctional & integrative genomics2019

Genome-wide integrated analysis of miRNA and mRNA expression profiles to identify differentially expressed miR-22-5p and miR-27b-5p in response to classical swine fever vaccine virus.

Lalrengpuii Sailo, Amit Kumar, Vaishali Sah, Rajni Chaudhary, Vikramaditya Upmanyu, A K Tiwari, Ajay Kumar, Aruna Pandey, Shikha Saxena, Akansha Singh and 5 more

Abstract read
PubMed Publisher
In one paragraph

Article in Functional & integrative genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Lalrengpuii SailoAnimal Genetics, Indian Veterinary Research Institute, Izatnagar, Bareilly, 143122, India.
Amit KumarAnimal Genetics, Indian Veterinary Research Institute, Izatnagar, Bareilly, 143122, India. vetamitchandan07@gmail.com.ORCID http://orcid.org/0000-0002-4423-7881
Vaishali SahAnimal Genetics, Indian Veterinary Research Institute, Izatnagar, Bareilly, 143122, India.
Rajni ChaudharyAnimal Genetics, Indian Veterinary Research Institute, Izatnagar, Bareilly, 143122, India.
Vikramaditya UpmanyuStandardization Division, Indian Veterinary Research Institute, Izatnagar, Bareilly, 143122, India.
A K TiwariStandardization Division, Indian Veterinary Research Institute, Izatnagar, Bareilly, 143122, India.
Ajay KumarAnimal Biochemistry, Indian Veterinary Research Institute, Izatnagar, Bareilly, 143122, India.
Aruna PandeyAnimal Biochemistry, Indian Veterinary Research Institute, Izatnagar, Bareilly, 143122, India.
Shikha SaxenaAnimal Biochemistry, Indian Veterinary Research Institute, Izatnagar, Bareilly, 143122, India.
Akansha SinghAnimal Genetics and Breeding, Indian Veterinary Research Institute, Izatnagar, Bareilly, India.
Sajad Ahmad WaniOhio State University, Columbus, OH, USA.
Ravi Kumar GandhamAnimal Biotechnology, National Institute of Animal Biotechnology, Hyderabad, Telangana, 500032, India. gandham71@gmail.com.
Anil RaiHead Centre for Bioinformatics, IASRI, New Delhi, 110012, India.
B P MishraBiotechnology, Indian Veterinary Research Institute, Izatnagar, Bareilly, 143122, India.
R K SinghAnimal Biochemistry, Indian Veterinary Research Institute, Izatnagar, Bareilly, 143122, India.
Indian Veterinary Research Institute · INIndian Agricultural Statistics Research Institute · INNational Institute of Animal Biotechnology · INThe Ohio State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study was conducted to identify the differentially expressed miRNAs (DE miRNAs) in the peripheral blood mononuclear cells of crossbred pigs in response to CSF vaccination on 7 and 21 days of post vaccination as compared to unvaccinated control (0 dpv). Simultaneously, set of miRNA was predicted using mRNA seq data at same time point. The proportion of CD4

Indexed as

Gene Regulatory NetworksTranscriptomeAnimalsCD4-CD8 RatioClassical Swine FeverClassical Swine Fever VirusGuanine Nucleotide Exchange FactorsMicroRNAsMinor Histocompatibility AntigensRNA, Messengersrc-Family KinasesSwineToll-Like Receptor 4Viral VaccinesGuanine Nucleotide Exchange Factorslyn protein-tyrosine kinaseMicroRNAsMinor Histocompatibility AntigensRNA, Messengersrc-Family KinasesToll-Like Receptor 4Viral VaccinesClassical swine fevermiRNAPigRNA seq

Identifiers

PMID31134483
OpenAlexW2947520422

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.