Evidence map›Paper›PMID 31134296›Full record

ArticleNeuroradiology2019

MR imaging phenotype correlates with extent of genome-wide copy number abundance in IDH mutant gliomas.

Chih-Chun Wu, Rajan Jain, Lucidio Neto, Seema Patel, Laila M Poisson, Jonathan Serrano, Victor Ng, Sohil H Patel, Dimitris G Placantonakis, David Zagzag and 3 more

Abstract read
In one paragraph

Article in Neuroradiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. T2-FLAIR Mismatch Sign Predicts DNA Methylation Subclass and CDKN2A/B Status in IDH-Mutant Astrocytomas.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Chih-Chun WuDepartment of Radiology, Taipei Veterans General Hospital, Taipei, Republic of China.
Rajan JainDepartment of Radiology, NYU School of Medicine, New York, NY, USA. rajan.jain@nyumc.org.
Lucidio NetoDepartment of Radiology, NYU School of Medicine, New York, NY, USA.
Seema PatelDepartment of Pathology, NYU School of Medicine, New York, NY, USA.
Laila M PoissonDepartment of Public Health Sciences and Hermelin Brain Tumor Center, Henry Ford Hospital, Detroit, MI, USA.
Jonathan SerranoDepartment of Pathology, NYU School of Medicine, New York, NY, USA.
Victor NgDepartment of Radiology, NYU School of Medicine, New York, NY, USA.
Sohil H PatelDepartment of Radiology and Medical Imaging, University of Virginia Health System, Charlottesville, VA, USA.
Dimitris G PlacantonakisDepartment of Neurosurgery, NYU School of Medicine, 660 First Avenue, 2nd Floor, New York, NY, 10016, USA.
David ZagzagDepartment of Pathology, NYU School of Medicine, New York, NY, USA.
John GolfinosDepartment of Neurosurgery, NYU School of Medicine, 660 First Avenue, 2nd Floor, New York, NY, 10016, USA.
Andrew S ChiNeuro-Oncology Program, Laura and Isaac Perlmutter Cancer Center, NYU School of Medicine and Langone Health, New York, NY, USA.
Matija SnuderlDepartment of Pathology, NYU School of Medicine, New York, NY, USA.

Funding

The role of GPR133 in glioblastomaR01NS102665 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI PLACANTONAKIS, DIMITRIS G. · 2018 to 2022
$2.3M
Metabolic aberrations in glioma initiationR03NS087349 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NEUBERT, THOMAS A, PLACANTONAKIS, DIMITRIS G. · 2015 to 2016
$170k
NINDS NIH HHS R01 NS102665NINDS NIH HHS R03 NS087349
6 · The paper itself

Abstract

purposeThere is variability in survival within IDH mutant gliomas determined by chromosomal events. Copy number variation (CNV) abundance associated with survival in low-grade and IDH mutant astrocytoma has been reported. Our purpose was to correlate the extent of genome-wide CNV abundance in IDH mutant astrocytomas with MRI features.

methodsPresurgical MRI and CNV plots derived from Illumina 850k EPIC DNA methylation arrays of 18 cases of WHO grade II-IV IDH mutant astrocytomas were reviewed. IDH mutant astrocytomas were divided into CNV stable group (CNV-S) with ≤ 3 chromosomal gains or losses and lack of focal gene amplifications and CNV unstable group (CNV-U) with > 3 large chromosomal gains/losses and/or focal amplifications. The associations between MR features, relative cerebral blood volume (rCBV), CNV abundance, and time to progression were assessed. Tumor rCBV estimates were obtained using DSC T2* perfusion analysis.

resultsThere were nine (50%) CNV-S and nine (50%) CNV-U IDH mutant astrocytomas. CNV-U tumors showed larger mean tumor size (P = 0.004) and maximum diameter on FLAIR (P = 0.004) and also demonstrated significantly higher median rCBV than CNV-S tumors (2.62 vs 0.78, P = 0.019). CNV-U tumors tended to have shorter time to progression although without statistical significance (P = 0.393).

conclusionsLarger size/diameter and higher rCBVs were seen associated CNV-U astrocytomas, suggesting a correlation of aggressive imaging phenotype with unstable and aggressive genotype in IDH mutant astrocytomas.

Indexed as

AdultAgedAged, 80 and overAstrocytomaBrain NeoplasmsDNA Copy Number VariationsFemaleHumansIsocitrate DehydrogenaseMagnetic Resonance ImagingMaleMiddle AgedPhenotypeRetrospective StudiesYoung AdultIsocitrate DehydrogenaseGenomicsGliomaImagingRadiogenomics

Identifiers

PMID31134296
PMCPMC7587301

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.