Evidence map›Paper›PMID 31133771›Full record

ArticleStructural equation modeling : a multidisciplinary journal2019

Cloud computing for voxel-wise SEM analysis of MRI data.

Joshua N Pritikin, J Eric Schmitt, Michael C Neale

Abstract read
In one paragraph

Article in Structural equation modeling : a multidisciplinary journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Joshua N PritikinDepartment of Psychiatry and Virginia Institute for Psychiatric and Behavior Genetics, Virginia Commonwealth University.
J Eric SchmittDepartments of Radiology and Psychiatry, Hospital of the University of Pennsylvania.
Michael C NealeDepartments of Psychiatry and Human & Molecular Genetics, Virginia Institute for Psychiatric and Behavior Genetics, Virginia Commonwealth University.

Funding

Research Education in Statistical Genetics of Substance AbuseR25DA026119 · NIDA · VIRGINIA COMMONWEALTH UNIVERSITY · PI NEALE, MICHAEL CHURTON · 2008 to 2018
$3.2M
Psychometric and Genetic Assessments of Substance UseR01DA018673 · NIDA · VIRGINIA COMMONWEALTH UNIVERSITY · PI NEALE, MICHAEL CHURTON · 2004 to 2019
$2.3M
INGOT: a family of statistical computing algorithms for hypothesis-driven imaging genomic and longitudinal neuroimaging analysisK01ES026840 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI SCHMITT, JAMES E · 2015 to 2017
$276k
NIDA NIH HHS R01 DA018673NIDA NIH HHS R25 DA026119NIEHS NIH HHS K01 ES026840
6 · The paper itself

Abstract

As data collection costs fall and vast quantities of data are collected, data analysis time can become a bottleneck. For massively parallel analyses, cloud computing offers the short-term rental of ample processing power. Recent software innovations have reduced the offort needed to take advantage of cloud computing. To demonstrate, we replicate a voxel-wise examination of the genetic contributions to cortical development by age using evidence from 1,748 MRI scans. Specifically, we employ off-the-shelf Kubernetes software that permits us to re-run our analyses using almost the same computer code as was published in the original article. Large, well funded institutions may continue to maintain their own computing clusters. However, the modest cost of renting and ease of utilizing cloud computing services makes unprecedented compute power available to all researchers, whether or not affliated with a research institution. We expect this to spur innovation in the sophisticated modeling of large datasets.

Indexed as

big datacloud computingdevelopmentalecological momentary assessmentfMRIgeneticsgenomic SEMGWASmethylomicsneuroimagingtime seriestwins

Identifiers

PMID31133771
PMCPMC6534137

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.