Evidence map›Paper›PMID 31133602›Full record

ArticleBlood2019

NMR structure determination of Ixolaris and factor X(a) interaction reveals a noncanonical mechanism of Kunitz inhibition.

Viviane S De Paula, Nikolaos G Sgourakis, Ivo M B Francischetti, Fabio C L Almeida, Robson Q Monteiro, Ana Paula Valente

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Biomolecular NMR assignments · 2026
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  10. Development ofClinical & experimental metastasis · 2020
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Viviane S De PaulaDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, CA.ORCID 0000-0003-3171-6477
Nikolaos G SgourakisDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, CA.ORCID 0000-0003-3655-3902
Ivo M B FrancischettiVector Biology Section, Laboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD.ORCID 0000-0002-5764-5454
Fabio C L AlmeidaCentro de Biologia Estrutural e Bioimagem, Rio de Janeiro, Brazil.ORCID 0000-0001-6046-7006
Robson Q MonteiroInstituto de Bioquímica Médica, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.ORCID 0000-0002-5260-2332
Ana Paula ValenteCentro de Biologia Estrutural e Bioimagem, Rio de Janeiro, Brazil.ORCID 0000-0001-7219-1123
Universidade Federal do Rio de Janeiro · BRUniversity of California, Santa Cruz · USNational Institutes of Health · US

Funding

An integrative structural biology approach to understanding metabolite recognition by cellular receptorsR35GM125034 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI SGOURAKIS, NIKOLAOS · 2017 to 2025
$4.7M
Molecular mechanism of antigen editing by Class-I MHC ChaperonesR01AI143997 · NIAID · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI SGOURAKIS, NIKOLAOS · 2019 to 2023
$4.0M
NIAID NIH HHS R01 AI143997NIGMS NIH HHS R35 GM125034
6 · The paper itself

Abstract

Ixolaris is a potent tick salivary anticoagulant that binds coagulation factor Xa (FXa) and zymogen FX, with formation of a quaternary tissue factor (TF)/FVIIa/ FX(a)/Ixolaris inhibitory complex. Ixolaris blocks TF-induced coagulation and PAR2 signaling and prevents thrombosis, tumor growth, and immune activation. We present a high-resolution structure and dynamics of Ixolaris and describe the structural basis for recognition of FX. Ixolaris consists of 2 Kunitz domains (K1 and K2) in which K2 is strikingly dynamic and encompasses several residues involved in FX binding. This indicates that the backbone plasticity of K2 is critical for Ixolaris biological activity. Notably, a nuclear magnetic resonance-derived model reveals a mechanism for an electrostatically guided, high-affinity interaction between Ixolaris and FX heparin-binding (pro)exosite, resulting in an allosteric switch in the catalytic site. This is the first report revealing the structure-function relationship of an anticoagulant targeting a zymogen serving as a scaffold for TF inhibition.

Indexed as

AnimalsFactor XaFactor Xa InhibitorsHumansMolecular Docking SimulationNuclear Magnetic Resonance, BiomolecularProtein ConformationProtein DomainsSalivary Proteins and PeptidesTicksFactor XaFactor Xa InhibitorsIxolaris protein, Ixodes scapularisSalivary Proteins and Peptides

Identifiers

PMID31133602
PMCPMC6706809
OpenAlexW2947211468

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.