Evidence map›Paper›PMID 31130935›Full record

ArticleFrontiers in microbiology2019

Freezing Tolerance of Thermophilic Bacterial Endospores in Marine Sediments.

Margaret A Cramm, Anirban Chakraborty, Carmen Li, S Emil Ruff, Bo Barker Jørgensen, Casey R J Hubert

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. ProfilingFuture science OA · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Margaret A CrammGeomicrobiology Group, Department of Biological Sciences, University of Calgary, Calgary, AB, Canada.
Anirban ChakrabortyGeomicrobiology Group, Department of Biological Sciences, University of Calgary, Calgary, AB, Canada.
Carmen LiGeomicrobiology Group, Department of Biological Sciences, University of Calgary, Calgary, AB, Canada.
S Emil RuffEnergy Bioengineering Group, Department of Geoscience, University of Calgary, Calgary, AB, Canada.
Bo Barker JørgensenCenter for Geomicrobiology, Department of Bioscience, Aarhus University, Aarhus, Denmark.
Casey R J HubertGeomicrobiology Group, Department of Biological Sciences, University of Calgary, Calgary, AB, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dormant endospores of anaerobic, thermophilic bacteria found in cold marine sediments offer a useful model for studying microbial biogeography, dispersal, and survival. The dormant endospore phenotype confers resistance to unfavorable environmental conditions, allowing dispersal to be isolated and studied independently of other factors such as environmental selection. To study the resilience of thermospores to conditions relevant for survival in extreme cold conditions, their viability following different freezing treatments was tested. Marine sediment was frozen at either -80°C or -20°C for 10 days prior to pasteurization and incubation at +50°C for 21 days to assess thermospore viability. Sulfate reduction commenced at +50°C following both freezing pretreatments indicating persistence of thermophilic endospores of sulfate-reducing bacteria. The onset of sulfate reduction at +50°C was delayed in -80°C pretreated microcosms, which exhibited more variability between triplicates, compared to -20°C pretreated microcosms and parallel controls that were not frozen in advance. Microbial communities were evaluated by 16S rRNA gene amplicon sequencing, revealing an increase in the relative sequence abundance of thermophilic endospore-forming

Indexed as

endosporesextremophilesfrozen environmentsmicrobial dispersalmicrobial ecologypanspermiasporesthermophiles

Identifiers

PMID31130935
PMCPMC6509201

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.