Evidence map›Paper›PMID 31125367›Full record

ArticlePloS one2019

Prevalence and concentration of stx+ E. coli and E. coli O157 in bovine manure from Florida farms.

Christopher A Baker, Jaysankar De, Bruna Bertoldi, Laurel Dunn, Travis Chapin, Michele Jay-Russell, Michelle D Danyluk, Keith R Schneider

Abstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Prevalence of Shiga-ToxigenicMicroorganisms · 2025
    Article
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  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Christopher A BakerDepartment of Food Science and Human Nutrition, University of Florida, Gainesville, Florida, United States of America.
Jaysankar DeDepartment of Food Science and Human Nutrition, University of Florida, Gainesville, Florida, United States of America.ORCID 0000-0001-9799-9401
Bruna BertoldiDepartment of Food Science and Human Nutrition, University of Florida, Gainesville, Florida, United States of America.
Laurel DunnCitrus Research and Education Center, University of Florida, Lake Alfred, Florida, United States of America.
Travis ChapinCitrus Research and Education Center, University of Florida, Lake Alfred, Florida, United States of America.
Michele Jay-RussellWestern Center for Food Safety, University of California, Davis, California, United States of America.
Michelle D DanylukDepartment of Food Science and Human Nutrition, University of Florida, Gainesville, Florida, United States of America.
Keith R SchneiderDepartment of Food Science and Human Nutrition, University of Florida, Gainesville, Florida, United States of America.ORCID 0000-0003-0145-3418

Funding

WESTERN CENTER FOR FOOD SAFETYU19FD004995 · FDA · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Edward Robert Atwill · 2013 to 2026
$25.1M
FDA HHS U19 FD004995
6 · The paper itself

Abstract

Fresh produce outbreaks due to Shiga toxin-producing Escherichia coli (STEC) continue to occur in the United States (US). Manure-amended soils can pose a public health risk when used for growing raw agricultural commodities. Knowing the prevalence and concentration of STEC in untreated biological soil amendments of animal origin (BSAAO) is important to help guide the most appropriate pre-harvest interval(s) following application to limit risks from these soil amendments. Bovine manure samples were collected from 12 farms in Florida, including samples from piles, lagoons, barns, and screened solids. Two methods were used to detect stx1/2 and rfbE genes in samples. A prevalence rate of 9% for stx1 and/or stx2 and 19% for rfbE was observed from the 518 bovine manure samples evaluated. A most probable number (MPN) assay was performed on stx+ samples when applicable. The geometric mean for stx+ samples (n = 20) was 3.37 MPN g-1 (0.53 log MPN g-1) with a maximum value of 6,800 MPN g-1 (3.83 log MPN g-1). This research was part of a larger nationwide geographical study on the prevalence and concentration of STEC in bovine manure to help guide regulations on feasible pre-harvest intervals for the application of untreated BSAAO.

Indexed as

Food MicrobiologySoil MicrobiologyAnimalsCattleCattle DiseasesEscherichia coli InfectionsEscherichia coli O157FarmsFloridaHumansManureShiga-Toxigenic Escherichia coliManure

Identifiers

PMID31125367
PMCPMC6534375

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.