Evidence map›Paper›PMID 31124079›Full record

ArticleMolecular neurobiology2019

Development of a Novel Neuro-immune and Opioid-Associated Fingerprint with a Cross-Validated Ability to Identify and Authenticate Unknown Patients with Major Depression: Far Beyond Differentiation, Discrimination, and Classification.

Hussein Kadhem Al-Hakeim, Suhaer Zeki Al-Fadhel, Arafat Hussein Al-Dujaili, Andre Carvalho, Sira Sriswasdi, Michael Maes

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Article in Molecular neurobiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

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6citing papers in PubMed
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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Hussein Kadhem Al-HakeimDepartment of Chemistry, College of Science, University of Kufa, Kufa, Iraq.
Suhaer Zeki Al-FadhelDepartment of Clinical Laboratory Sciences, College of Pharmacy, University of Kufa, Kufa, Iraq.
Arafat Hussein Al-DujailiFaculty of Medicine, University of Kufa, Kufa, Iraq.
Andre CarvalhoDepartment of Psychiatry, University of Toronto, Toronto, ON, Canada.
Sira SriswasdiResearch Affairs, Chulalongkorn University, Bangkok, Thailand.
Michael MaesDepartment of Psychiatry, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand. dr.michaelmaes@hotmail.com.ORCID http://orcid.org/0000-0002-2012-871X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Major depressive disorder (MDD) is characterized by signaling aberrations in interleukin (IL)-6, IL-10, beta-endorphins as well as μ (MOR) and κ (KOR) opioid receptors. Here we examined whether these biomarkers may aid in the classification of unknown subjects into the target class MDD. The aforementioned biomarkers were assayed in 60 first-episode, drug-naïve depressed patients and 30 controls. We used joint principal component analysis (PCA) performed on all subjects to check whether subjects cluster by classes; support vector machine (SVM) with 10-fold validation; and linear discriminant analysis (LDA) and SIMCA performed on calibration and validation sets and we computed the figures of merit and learnt from the data. PCA shows that both groups were well separated using the first three PCs, while correlation loadings show that all five biomarkers have discriminatory value. SVM and LDA yielded an accuracy of 100% in validation samples. Using SIMCA, there was a highly significant discrimination of both groups (model-to-model distance = 110.2); all biomarkers showed a significant discrimination and modeling power, while 100% of the patients were authenticated as MDD cases with a specificity of 93.3%. We have delineated that MDD is a distinct class with respect to neuro-immune and opioid biomarkers and that future unknown subjects can be authenticated as having MDD using this SIMCA fingerprint. Precision psychiatry should employ SIMCA to (a) authenticate patients as belonging to the claimed target class and identify other subjects as outsiders, members of another class, or aliens; and (b) acquire knowledge through learning from the data by constructing a biomarker fingerprint of the target class.

Indexed as

AdolescentAdultAgedAnalgesics, OpioidBiomarkersDiscriminant AnalysisHumansLinear ModelsMajor Depressive DisorderMaleMiddle AgedPrincipal Component AnalysisReproducibility of ResultsSupport Vector MachineYoung AdultAnalgesics, OpioidBiomarkersCytokinesInflammationMajor depressionNeuro-immuneOpioidsSupervised learning

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.