Evidence map›Paper›PMID 31123184›Full record

ArticleThe Journal of cell biology2019

XLF and H2AX function in series to promote replication fork stability.

Bo-Ruei Chen, Annabel Quinet, Andrea K Byrum, Jessica Jackson, Matteo Berti, Saravanabhavan Thangavel, Andrea L Bredemeyer, Issa Hindi, Nima Mosammaparast, Jessica K Tyler and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Antioxidants (Basel, Switzerland) · 2023
    Article
  3. Article
  4. Histone H2A variants: Diversifying chromatin to ensure genome integrity.Seminars in cell & developmental biology · 2023
    Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Bo-Ruei Chen *Department of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, NY.ORCID 0000-0002-7722-848X
Annabel Quinet *Edward A. Doisy Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO.ORCID 0000-0003-0852-6181
Andrea K ByrumDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO.ORCID 0000-0002-5597-8933
Jessica JacksonEdward A. Doisy Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO.
Matteo BertiEdward A. Doisy Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO.
Saravanabhavan ThangavelEdward A. Doisy Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO.ORCID 0000-0001-6760-4106
Andrea L BredemeyerDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO.
Issa HindiDepartment of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, NY.
Nima MosammaparastDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO.
Jessica K TylerDepartment of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, NY.
Alessandro VindigniEdward A. Doisy Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO alessandro.vindigni@health.slu.edu.
Barry P SleckmanDepartment of Pathology and Laboratory Medicine, Weill Cornell Medical College, New York, NY bas2022@med.cornell.edu.ORCID 0000-0001-8295-4462
Saint Louis University · USCornell University · USWashington University in St. Louis · US

Funding

THE V(D)J RECOMBINATION REACTION AND ITS IMPACT ON LYMPHOCYTE DEVELOPMENTR01AI047829 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI SLECKMAN, BARRY P · 2000 to 2021
$7.0M
ATM FUNCTION DURING V(D)J RECOMBINATIONR01AI074953 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI SLECKMAN, BARRY P · 2009 to 2023
$5.9M
Chromatin's Role in Repair of Radiation-induced Damage.R01CA095641 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI TYLER, JESSICA K · 2002 to 2023
$5.2M
New Mechanisms of Replication Stress ResponseR01GM108648 · NIGMS · SAINT LOUIS UNIVERSITY · PI VINDIGNI, ALESSANDRO · 2014 to 2018
$1.4M
NCI NIH HHS R01 CA095641NIAID NIH HHS R01 AI047829NIAID NIH HHS R01 AI074953NIGMS NIH HHS R01 GM108648
6 · The paper itself

Abstract

XRCC4-like factor (XLF) is a non-homologous end joining (NHEJ) DNA double strand break repair protein. However, XLF deficiency leads to phenotypes in mice and humans that are not necessarily consistent with an isolated defect in NHEJ. Here we show that XLF functions during DNA replication. XLF undergoes cell division cycle 7-dependent phosphorylation; associates with the replication factor C complex, a critical component of the replisome; and is found at replication forks. XLF deficiency leads to defects in replication fork progression and an increase in fork reversal. The additional loss of H2AX, which protects DNA ends from resection, leads to a requirement for ATR to prevent an MRE11-dependent loss of newly synthesized DNA and activation of DNA damage response. Moreover,

Indexed as

AnimalsAtaxia Telangiectasia Mutated ProteinsCell DivisionDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA DamageDNA End-Joining RepairDNA RepairDNA ReplicationFibroblastsHistonesMiceMRE11 Homologue ProteinPhosphorylationAtaxia Telangiectasia Mutated ProteinsAtr protein, mouseDNA-Binding Proteinsgamma-H2AX protein, mouseHistonesMre11a protein, mouseMRE11 Homologue ProteinXLF protein, mouse

Identifiers

PMID31123184
PMCPMC6605786
OpenAlexW2945386924

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.