Evidence map›Paper›PMID 31123078›Full record

ArticleRNA (New York, N.Y.)2019

In silico survey of the central conserved regions in viroids of the

Paul Freidhoff, Michael F Bruist

Open access · bronzeAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in RNA (New York, N.Y.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Progress in 50 years of viroid research-Molecular structure, pathogenicity, and host adaptation.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Paul FreidhoffDepartment of Chemistry and Biochemistry, University of the Sciences, Philadelphia, Pennsylvania 19104, USA.
Michael F BruistDepartment of Chemistry and Biochemistry, University of the Sciences, Philadelphia, Pennsylvania 19104, USA.
University of the Sciences · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Viroids are the smallest replicative pathogens, consisting of RNA circles (∼300 nucleotides) that require host machinery to replicate. Structural RNA elements recruit these host factors. Currently, many of these structural elements and the nature of their interactions are unknown. All

Indexed as

Base SequenceComputational BiologyComputer SimulationConserved SequenceModels, MolecularMolecular Dynamics SimulationNucleic Acid ConformationPhylogenyProtein DomainsRNA, ViralViroidsRNA, Viralconstant pH replica exchange molecular dynamicsLoop E RNAmolecular dynamicsRNA domainsRNA dynamicsRNA mimicrysarcin/ricin domainS-turn

Identifiers

PMID31123078
PMCPMC6633198
OpenAlexW2945380764

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.