Evidence map›Paper›PMID 31121974›Full record

ArticleGenes2019

Heat Stress-Responsive Transcriptome Analysis in the Liver Tissue of Hu Sheep.

Yaokun Li, Lingxuan Kong, Ming Deng, Zhiquan Lian, Yinru Han, Baoli Sun, Yongqing Guo, Guangbin Liu, Dewu Liu

Open access · goldAbstract read
In one paragraph

Article in Genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 42 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Yaokun LiCollege of Animal Science, South China Agricultural University, Guangzhou, GD, 510642, China. liyaokun1986@163.com.
Lingxuan KongCollege of Animal Science, South China Agricultural University, Guangzhou, GD, 510642, China. 18344308934@163.com.
Ming DengCollege of Animal Science, South China Agricultural University, Guangzhou, GD, 510642, China. dengming@scau.edu.cn.
Zhiquan LianCollege of Animal Science, South China Agricultural University, Guangzhou, GD, 510642, China. 18820425216@163.com.
Yinru HanCollege of Animal Science, South China Agricultural University, Guangzhou, GD, 510642, China. hyr_19941128@sina.cn.
Baoli SunCollege of Animal Science, South China Agricultural University, Guangzhou, GD, 510642, China. baolisun@scau.edu.cn.
Yongqing GuoCollege of Animal Science, South China Agricultural University, Guangzhou, GD, 510642, China. yongqing@scau.edu.cn.
Guangbin LiuCollege of Animal Science, South China Agricultural University, Guangzhou, GD, 510642, China. gbliu@scau.edu.cn.
Dewu LiuCollege of Animal Science, South China Agricultural University, Guangzhou, GD, 510642, China. dwliu@scau.edu.cn.
South China Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heat stress has a severe effect on animal health and can reduce the productivity and reproductive efficiency; it is therefore necessary to explore the molecular mechanism involved in heat stress response, which is helpful for the cultivation of an animal breed with resistance to heat stress. However, little research about heat stress-responsive molecular analysis has been reported in sheep. Therefore, in this study, RNA sequencing (RNA-Seq) was used to investigate the transcriptome profiling in the liver of Hu sheep with and without heat stress. In total, we detected 520 and 22 differentially expressed mRNAs and lncRNAs, respectively. The differentially expressed mRNAs were mainly associated with metabolic processes, the regulation of biosynthetic processes, and the regulation of glucocorticoid; additionally, they were significantly enriched in the heat stress related pathways, including the carbon metabolism, the PPAR signaling pathway, and vitamin digestion and absorption. The co-located differentially expressed lncRNA Lnc_001782 might positively influence the expression of the corresponding genes APOA4 and APOA5, exerting co-regulative effects on the liver function. Thus, we made the hypothesis that Lnc_001782, APOA4 and APOA5 might function synergistically to regulate the anti-heat stress ability in Hu sheep. This study provides a catalog of Hu sheep liver mRNAs and lncRNAs, and will contribute to a better understanding of the molecular mechanism underlying heat stress responses.

Indexed as

AnimalsGene Expression ProfilingGene Regulatory NetworksHeat-Shock ResponseLiverReproductionRNA, Long NoncodingRNA, MessengerSequence Analysis, RNASheepTranscriptomeRNA, Long NoncodingRNA, Messengerheat stressHu sheeplncRNAmRNAtranscriptome analysis

Identifiers

PMID31121974
PMCPMC6562622
OpenAlexW2945839229

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.