Evidence map›Paper›PMID 31120883›Full record

ArticlePLoS genetics2019

Gata4 regulates hedgehog signaling and Gata6 expression for outflow tract development.

Jielin Liu, Henghui Cheng, Menglan Xiang, Lun Zhou, Bingruo Wu, Ivan P Moskowitz, Ke Zhang, Linglin Xie

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. RNA binding proteins in cardiovascular development and disease.Current topics in developmental biology · 2024
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  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Mutations in RNA Methyltransferase GeneFrontiers in cell and developmental biology · 2021
    Article
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  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Jielin LiuDepartment of Nutrition and Food Sciences, Texas A&M University, College Station, Texas, United States of America.ORCID 0000-0001-9596-8943
Henghui ChengDepartment of Nutrition and Food Sciences, Texas A&M University, College Station, Texas, United States of America.
Menglan XiangDepartment of Biomedical Sciences, University of North Dakota, Grand Forks, North Dakota, United States of America.ORCID 0000-0003-4234-4998
Lun ZhouDepartment of Biomedical Sciences, University of North Dakota, Grand Forks, North Dakota, United States of America.
Bingruo WuDepartments of Genetics, Pediatrics, and Medicine (Cardiology), Albert Einstein College of Medicine of Yeshiva University, Bronx, NY, United States of America.
Ivan P MoskowitzDepartments of Pathology and Pediatrics, The University of Chicago, Chicago, Illinois, United States of America.
Ke ZhangDepartment of Nutrition and Food Sciences, Texas A&M University, College Station, Texas, United States of America.
Linglin XieDepartment of Nutrition and Food Sciences, Texas A&M University, College Station, Texas, United States of America.ORCID 0000-0002-3502-5342
University of North Dakota · USAlbert Einstein College of Medicine · USPrevention Institute · USTongji Hospital · CNUniversity of Chicago · US

Funding

Gene Interaction Study of Tbx5, Hh pathway and Osr1 in atrial septationR15HL117238 · NHLBI · UNIVERSITY OF NORTH DAKOTA · PI ZHANG, KE KURT · 2013 to 2013
$394k
An important role of Osr1 in outflow tract developmentR56HL138479 · NHLBI · TEXAS A&M AGRILIFE RESEARCH · PI XIE, LINGLIN · 2017 to 2017
$367k
NHLBI NIH HHS R15 HL117238NHLBI NIH HHS R56 HL138479
6 · The paper itself

Abstract

Dominant mutations of Gata4, an essential cardiogenic transcription factor (TF), were known to cause outflow tract (OFT) defects in both human and mouse, but the underlying molecular mechanism was not clear. In this study, Gata4 haploinsufficiency in mice was found to result in OFT defects including double outlet right ventricle (DORV) and ventricular septum defects (VSDs). Gata4 was shown to be required for Hedgehog (Hh)-receiving progenitors within the second heart field (SHF) for normal OFT alignment. Restored cell proliferation in the SHF by knocking-down Pten failed to rescue OFT defects, suggesting that additional cell events under Gata4 regulation is important. SHF Hh-receiving cells failed to migrate properly into the proximal OFT cushion, which is associated with abnormal EMT and cell proliferation in Gata4 haploinsufficiency. The genetic interaction of Hh signaling and Gata4 is further demonstrated to be important for OFT development. Gata4 and Smo double heterozygotes displayed more severe OFT abnormalities including persistent truncus arteriosus (PTA). Restoration of Hedgehog signaling renormalized SHF cell proliferation and migration, and rescued OFT defects in Gata4 haploinsufficiency. In addition, there was enhanced Gata6 expression in the SHF of the Gata4 heterozygotes. The Gata4-responsive repressive sites were identified within 1kbp upstream of the transcription start site of Gata6 by both ChIP-qPCR and luciferase reporter assay. These results suggested a SHF regulatory network comprising of Gata4, Gata6 and Hh-signaling for OFT development.

Indexed as

AnimalsCell MovementCell ProliferationEmbryo, MammalianGATA4 Transcription FactorGATA6 Transcription FactorGene Expression RegulationHaploinsufficiencyHedgehog ProteinsHeterozygoteHumansMiceMice, TransgenicMyocytes, CardiacSignal TransductionSmoothened ReceptorGata4 protein, mouseGATA4 Transcription FactorGata6 protein, mouseGATA6 Transcription FactorHedgehog ProteinsShh protein, mouseSmoothened ReceptorSmo protein, mouse

Identifiers

PMID31120883
PMCPMC6550424
OpenAlexW2945154955

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.