Evidence map›Paper›PMID 31119591›Full record

ArticleEcotoxicology (London, England)2019

Transcriptomic responses of the clam Meretrix meretrix to the organophosphorus pesticide (dimethoate).

Jun Cao, Bingxu Wang, Xiaona Tan

Abstract read
PubMed Publisher
In one paragraph

Article in Ecotoxicology (London, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Characterization and molecular evolution of claudin genes in the Pungitius sinensis.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2020
    Article
  3. Molecular Evolution and Characterization of Fish Stathmin Genes.Animals : an open access journal from MDPI · 2020
    Article
  4. Article
  5. Transcriptome-Based Identification and Molecular Evolution of theAnimals : an open access journal from MDPI · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jun CaoInstitute of Life Sciences, Jiangsu University, Zhenjiang, Jiangsu, 212013, P. R. China. cjinfor@163.com.
Bingxu WangFaculty of Science, Jiangsu University, Zhenjiang, Jiangsu, 212013, P. R. China.
Xiaona TanInstitute of Life Sciences, Jiangsu University, Zhenjiang, Jiangsu, 212013, P. R. China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Organophosphorus pesticides (OPs) play a certain role in promoting the development of agriculture and forestry, but they may cause potential harm to aquatic life when entering rivers and polluting water sources. Previous researches have shown that OPs participate in the regulation mechanism of aquatic organisms. Here, our aim is to determine the underlying mechanisms of one OP (dimethoate) at the transcriptional level using the clam Meretrix meretrix. 4119 DEGs were obtained from high-throughput RNA sequencing data. Then, expression profiles of some genes were verified by qPCR, which showed a positive correlation with the RNA sequencing results. 14,481 simple sequence repeats were also identified and could be further used as molecular markers. In addition, some oxidative, immune, and stress-related genes were further discussed and could also be used as biomarkers to indicate the biological response of dimethoate. This study will help to better understand the clam's response mechanism to dimethoate stress.

Indexed as

AnimalsBivalviaDimethoateInsecticidesMicrosatellite RepeatsTranscriptomeWater Pollutants, ChemicalDimethoateInsecticidesWater Pollutants, ChemicalBioinformaticsGene expressionMeretrix meretrixOrganophosphorus pesticideTranscriptome

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.