Evidence map›Paper›PMID 31119430›Full record

ArticleExtremophiles : life under extreme conditions2019

Characterization of a thermoactive endoglucanase isolated from a biogas plant metagenome.

Barbara Klippel, Saskia Blank, Viktoria-Astrid Janzer, Henning Piascheck, Cyril Moccand, Rachid Bel-Rhlid, Garabed Antranikian

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Article in Extremophiles : life under extreme conditions, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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  3. Review
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  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Barbara KlippelInstitute of Technical Microbiology, Hamburg University of Technology (TUHH), Hamburg, Germany. barbara.klippel@tu-harburg.de.
Saskia BlankInstitute of Technical Microbiology, Hamburg University of Technology (TUHH), Hamburg, Germany.
Viktoria-Astrid JanzerInstitute of Technical Microbiology, Hamburg University of Technology (TUHH), Hamburg, Germany.
Henning PiascheckInstitute of Technical Microbiology, Hamburg University of Technology (TUHH), Hamburg, Germany.
Cyril MoccandChemistry and Biotechnology Department, Nestlé Research Center, Institute of Materials Science, Lausanne, Switzerland.
Rachid Bel-RhlidChemistry and Biotechnology Department, Nestlé Research Center, Institute of Materials Science, Lausanne, Switzerland.
Garabed AntranikianInstitute of Technical Microbiology, Hamburg University of Technology (TUHH), Hamburg, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A metagenomic library from DNA isolated from a biogas plant was constructed and screened for thermoactive endoglucanases to gain insight into the enzymatic diversity involved in plant biomass breakdown at elevated temperatures. Two cellulase-encoding genes were identified and the corresponding proteins showed sequence similarities of 59% for Cel5A to a putative cellulase from Anaerolinea thermolimosa and 99% for Cel5B to a characterized endoglucanase isolated from a biogas plant reactor. The cellulase Cel5A consists of one catalytical domain showing sequence similarities to glycoside hydrolase family 5 and comprises 358 amino acids with a predicted molecular mass of 41.2 kDa. The gene coding for cel5A was successfully cloned and expressed in Escherichia coli C43(DE3). The recombinant protein was purified to homogeneity using affinity chromatography with a specific activity of 182 U/mg, and a yield of 74%. Enzymatic activity was detectable towards cellulose and mannan containing substrates and over a broad temperature range from 40 °C to 70 °C and a pH range from 4.0 to 7.0 with maximal activity at 55 °C and pH 5.0. Cel5A showed high thermostability at 60 °C without loss of activity after 24 h. Due to the enzymatic characteristics, Cel5A is an attractive candidate for the degradation of lignocellulosic material.

Indexed as

MetagenomeThermotoleranceBacterial ProteinsBiofuelsCellulaseEnzyme StabilityMicrobiotaPower PlantsSubstrate SpecificityBacterial ProteinsBiofuelsCellulaseendoglucanase Cel5ABiogas plant, metagenomic libraryCellulaseThermostability

Identifiers

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.