Evidence map›Paper›PMID 31117233›Full record

ArticleMedicina (Kaunas, Lithuania)2019

Peptide Mapping, In Silico and In Vivo Analysis of Allergenic Sorghum Profilin Peptides.

Chandra Sekhar Bokka, Ganesh Kumar Veeramachaneni, V B S C Thunuguntla, Janakiram Bobbillapati, Jayakumar Singh Bondili

Open access · goldAbstract read
In one paragraph

Article in Medicina (Kaunas, Lithuania), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 8 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Chandra Sekhar BokkaDepartment of Biotechnology, Koneru Lakshmaiah Education Foundation, Green fields, Vaddeswaram, Guntur Dist., Andhra Pradesh 522 502, India. urschandu18@gmail.com.
Ganesh Kumar VeeramachaneniDepartment of Biotechnology, Koneru Lakshmaiah Education Foundation, Green fields, Vaddeswaram, Guntur Dist., Andhra Pradesh 522 502, India. ganesh.vgk55@gmail.com.
V B S C ThunuguntlaDepartment of Biotechnology, Koneru Lakshmaiah Education Foundation, Green fields, Vaddeswaram, Guntur Dist., Andhra Pradesh 522 502, India. balasaichaitanya@gmail.com.
Janakiram BobbillapatiDepartment of Microbiology, NRI Medical college and General Hospital, Guntur Dist., Andhra Pradesh 522 503, India. johnson.ratnam@gmail.com.
Jayakumar Singh BondiliDepartment of Biotechnology, Koneru Lakshmaiah Education Foundation, Green fields, Vaddeswaram, Guntur Dist., Andhra Pradesh 522 502, India. jksingh@kluniversity.in.
Koneru Lakshmaiah Education Foundation · INGuntur Medical College · IN

Funding

Indian Council of Medical Research DHR/Plan Scheme/GIA/10/2012
6 · The paper itself

Abstract

BACKGROUND AND

objectivesNearly 20-30% of the world's population suffers from allergic rhinitis, among them 15% are progressing to asthma conditions. MATERIALS AND

methodsTo map the antigenic determinants responsible for IgE binding, the present study is focused on in silico modeling, simulation of Sorb PF and docking of the Sorb PF peptides (PF1-6) against IgG and IgE, followed by in vivo evaluation of the peptides for its allergenicity in mice.

resultsPeptide PF3 and PF4 displayed high docking G-scores (-9.05) against IgE only. The mice sensitized with PF3 peptide showed increased levels of IL5, IL12, TNF-alpha, and GMCSF when compared to other peptides and controls, signifying a strong, Th2-based response. Concurrently, the Th1 pathway was inhibited by low levels of cytokine IL2, IFN-γ, and IL-10 justifying the role of PF3 in allergenic IgE response.

conclusionsBased on the results of overlapping peptides PF3 and PF4, the N-terminal part of the PF3 peptide (TGQALVI) plays a crucial role in allergenic response of Sorghum profilin.

Indexed as

Computer SimulationAnimalsDisease Models, AnimalEpitopesMicePeptide MappingProfilinsSorghumEpitopesProfilinsmodelingpeptide mappingpollen allergenprofilinSorghumTh1 and Th2 cytokine

Identifiers

PMID31117233
PMCPMC6571906
OpenAlexW2945419260

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.