Evidence map›Paper›PMID 31116799›Full record

ArticlePLoS pathogens2019

ZAP's stress granule localization is correlated with its antiviral activity and induced by virus replication.

Lok Man John Law, Brandon S Razooky, Melody M H Li, Shihyun You, Andrea Jurado, Charles M Rice, Margaret R MacDonald

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. Review
  15. Review
  16. Intracellular mono-ADP-ribosyltransferases at the host-virus interphase.Cellular and molecular life sciences : CMLS · 2022
    Review
  17. Review
  18. Article
  19. Article
  20. Self-amplifying mRNA-Based Vaccine Technology and Its Mode of Action.Current topics in microbiology and immunology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Lok Man John LawThe Laboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.
Brandon S RazookyThe Laboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.ORCID 0000-0002-5263-1512
Melody M H LiThe Laboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.ORCID 0000-0002-6905-7940
Shihyun YouThe Laboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.
Andrea JuradoThe Laboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.
Charles M RiceThe Laboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.
Margaret R MacDonaldThe Laboratory of Virology and Infectious Disease, The Rockefeller University, New York, NY, United States of America.ORCID 0000-0001-5177-2068
Rockefeller University · US

Funding

ZAP isoforms in innate immunity-the long, the short and the extra-long of it allR01AI114873 · NIAID · ROCKEFELLER UNIVERSITY · PI MACDONALD, MARGARET R · 2015 to 2019
$1.9M
Studies on ZAP, a broad-spectrum alphavirus inhibitorR01AI057905 · NIAID · ROCKEFELLER UNIVERSITY · PI MACDONALD, MARGARET R · 2005 to 2009
$1.8M
NIAID NIH HHS R01 AI057905NIAID NIH HHS R01 AI114873
6 · The paper itself

Abstract

Cellular antiviral programs encode molecules capable of targeting multiple steps in the virus lifecycle. Zinc-finger antiviral protein (ZAP) is a central and general regulator of antiviral activity that targets pathogen mRNA stability and translation. ZAP is diffusely cytoplasmic, but upon infection ZAP is targeted to particular cytoplasmic structures, termed stress granules (SGs). However, it remains unclear if ZAP's antiviral activity correlates with SG localization, and what molecular cues are required to induce this localization event. Here, we use Sindbis virus (SINV) as a model infection and find that ZAP's localization to SGs can be transient. Sometimes no apparent viral infection follows ZAP SG localization but ZAP SG localization always precedes accumulation of SINV non-structural protein, suggesting virus replication processes trigger SG formation and ZAP recruitment. Data from single-molecule RNA FISH corroborates this finding as the majority of cells with ZAP localization in SGs contain low levels of viral RNA. Furthermore, ZAP recruitment to SGs occurred in ZAP-expressing cells when co-cultured with cells replicating full-length SINV, but not when co-cultured with cells replicating a SINV replicon. ZAP recruitment to SGs is functionally important as a panel of alanine ZAP mutants indicate that the anti-SINV activity is correlated with ZAP's ability to localize to SGs. As ZAP is a central component of the cellular antiviral programs, these data provide further evidence that SGs are an important cytoplasmic antiviral hub. These findings provide insight into how antiviral components are regulated upon virus infection to inhibit virus spread.

Indexed as

Stress, PhysiologicalAlphavirus InfectionsAntiviral AgentsBone NeoplasmsCytoplasmic GranulesHumansOsteosarcomaProtein TransportRNA-Binding ProteinsRNA InterferenceRNA, MessengerSindbis VirusTumor Cells, CulturedVirus ReplicationAntiviral AgentsRNA-Binding ProteinsRNA, MessengerZC3HAV1 protein, human

Identifiers

PMID31116799
PMCPMC6548403
OpenAlexW2945321960

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.